Gene : Carub.0002s2175 C. rubella v1.1
Defline:  (1 of 2) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  2175
Name:  ? Carub.0002s2175 Secondary Identifier:  ? PAC:39244768
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella FASYN-ELONG-PWY Capsella rubella pathologic  
Crubella PWY-5156 Capsella rubella pathologic  
Crubella PWY-5971 Capsella rubella pathologic  
Crubella PWY-5973 Capsella rubella pathologic  
Crubella PWY-5989 Capsella rubella pathologic  
Crubella PWY-6282 Capsella rubella pathologic  
Crubella PWY-7388 Capsella rubella pathologic  
Crubella PWY-7663 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2175 0.5kb upstream 0.5kb upstream 4821 true scaffold_2: 11740424-11745244 Capsella rubella
Carub.0002s2175 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11744745-11745244 Capsella rubella
Carub.0002s2175 0.5kb downstream 0.5kb downstream 4821 true scaffold_2: 11739924-11744744 Capsella rubella
Carub.0002s2175 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11739924-11740423 Capsella rubella
Carub.0002s2175 1.0kb upstream 1.0kb upstream 5321 true scaffold_2: 11740424-11745744 Capsella rubella
Carub.0002s2175 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11744745-11745744 Capsella rubella
Carub.0002s2175 1.0kb downstream 1.0kb downstream 5321 true scaffold_2: 11739424-11744744 Capsella rubella
Carub.0002s2175 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11739424-11740423 Capsella rubella
Carub.0002s2175 2.0kb upstream 2.0kb upstream 6321 true scaffold_2: 11740424-11746744 Capsella rubella
Carub.0002s2175 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11744745-11746744 Capsella rubella
Carub.0002s2175 2.0kb downstream 2.0kb downstream 6321 true scaffold_2: 11738424-11744744 Capsella rubella
Carub.0002s2175 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11738424-11740423 Capsella rubella
Carub.0002s2175 5.0kb upstream 5.0kb upstream 9321 true scaffold_2: 11740424-11749744 Capsella rubella
Carub.0002s2175 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11744745-11749744 Capsella rubella
Carub.0002s2175 5.0kb downstream 5.0kb downstream 9321 true scaffold_2: 11735424-11744744 Capsella rubella
Carub.0002s2175 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11735424-11740423 Capsella rubella
Carub.0002s2175 10.0kb upstream 10.0kb upstream 14321 true scaffold_2: 11740424-11754744 Capsella rubella
Carub.0002s2175 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11744745-11754744 Capsella rubella
Carub.0002s2175 10.0kb downstream 10.0kb downstream 14321 true scaffold_2: 11730424-11744744 Capsella rubella
Carub.0002s2175 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11730424-11740423 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377296 5261 Brassicaceae View MSA
123839489 5264 Brassicales-Malvales View MSA
124340409 5266 SBM View MSA
124244965 5268 Malvidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain