Gene : Carub.0002s2203 C. rubella v1.1
Defline:  (1 of 1) PTHR12103:SF21 - IMP-GMP SPECIFIC 5-NUCLEOTIDASE, PUTATIVE-RELATED Genomic Order:  2203
Name:  ? Carub.0002s2203 Secondary Identifier:  ? PAC:39245765
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5381 Capsella rubella pathologic  
Crubella PWY-5695 Capsella rubella pathologic  
Crubella PWY-6596 Capsella rubella pathologic  
Crubella PWY-6606 Capsella rubella pathologic  
Crubella PWY-6608 Capsella rubella pathologic  
Crubella PWY-7185 Capsella rubella pathologic  
Crubella SALVADEHYPOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2203 0.5kb upstream 0.5kb upstream 5109 true scaffold_2: 11825319-11830427 Capsella rubella
Carub.0002s2203 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11825319-11825818 Capsella rubella
Carub.0002s2203 0.5kb downstream 0.5kb downstream 5109 true scaffold_2: 11825819-11830927 Capsella rubella
Carub.0002s2203 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11830428-11830927 Capsella rubella
Carub.0002s2203 1.0kb upstream 1.0kb upstream 5609 true scaffold_2: 11824819-11830427 Capsella rubella
Carub.0002s2203 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11824819-11825818 Capsella rubella
Carub.0002s2203 1.0kb downstream 1.0kb downstream 5609 true scaffold_2: 11825819-11831427 Capsella rubella
Carub.0002s2203 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11830428-11831427 Capsella rubella
Carub.0002s2203 2.0kb upstream 2.0kb upstream 6609 true scaffold_2: 11823819-11830427 Capsella rubella
Carub.0002s2203 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11823819-11825818 Capsella rubella
Carub.0002s2203 2.0kb downstream 2.0kb downstream 6609 true scaffold_2: 11825819-11832427 Capsella rubella
Carub.0002s2203 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11830428-11832427 Capsella rubella
Carub.0002s2203 5.0kb upstream 5.0kb upstream 9609 true scaffold_2: 11820819-11830427 Capsella rubella
Carub.0002s2203 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11820819-11825818 Capsella rubella
Carub.0002s2203 5.0kb downstream 5.0kb downstream 9609 true scaffold_2: 11825819-11835427 Capsella rubella
Carub.0002s2203 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11830428-11835427 Capsella rubella
Carub.0002s2203 10.0kb upstream 10.0kb upstream 14609 true scaffold_2: 11815819-11830427 Capsella rubella
Carub.0002s2203 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11815819-11825818 Capsella rubella
Carub.0002s2203 10.0kb downstream 10.0kb downstream 14609 true scaffold_2: 11825819-11840427 Capsella rubella
Carub.0002s2203 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11830428-11840427 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374675 5261 Brassicaceae View MSA
123833676 5264 Brassicales-Malvales View MSA
124339108 5266 SBM View MSA
124238660 5268 Malvidae View MSA
124068860 5270 Rosid View MSA
123738090 5271 Pentapetalae View MSA
122788601 5272 Eudicot View MSA
122047149 5273 Angiosperm View MSA
121350756 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain