Gene : Carub.0002s2511 C. rubella v1.1
Defline:  (1 of 1) PTHR10992//PTHR10992:SF837 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  2511
Name:  ? Carub.0002s2511 Secondary Identifier:  ? PAC:39245767
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2511 0.5kb upstream 0.5kb upstream 2113 true scaffold_2: 13100809-13102921 Capsella rubella
Carub.0002s2511 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13102422-13102921 Capsella rubella
Carub.0002s2511 0.5kb downstream 0.5kb downstream 2113 true scaffold_2: 13100309-13102421 Capsella rubella
Carub.0002s2511 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13100309-13100808 Capsella rubella
Carub.0002s2511 1.0kb upstream 1.0kb upstream 2613 true scaffold_2: 13100809-13103421 Capsella rubella
Carub.0002s2511 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13102422-13103421 Capsella rubella
Carub.0002s2511 1.0kb downstream 1.0kb downstream 2613 true scaffold_2: 13099809-13102421 Capsella rubella
Carub.0002s2511 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13099809-13100808 Capsella rubella
Carub.0002s2511 2.0kb upstream 2.0kb upstream 3613 true scaffold_2: 13100809-13104421 Capsella rubella
Carub.0002s2511 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13102422-13104421 Capsella rubella
Carub.0002s2511 2.0kb downstream 2.0kb downstream 3613 true scaffold_2: 13098809-13102421 Capsella rubella
Carub.0002s2511 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13098809-13100808 Capsella rubella
Carub.0002s2511 5.0kb upstream 5.0kb upstream 6613 true scaffold_2: 13100809-13107421 Capsella rubella
Carub.0002s2511 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13102422-13107421 Capsella rubella
Carub.0002s2511 5.0kb downstream 5.0kb downstream 6613 true scaffold_2: 13095809-13102421 Capsella rubella
Carub.0002s2511 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13095809-13100808 Capsella rubella
Carub.0002s2511 10.0kb upstream 10.0kb upstream 11613 true scaffold_2: 13100809-13112421 Capsella rubella
Carub.0002s2511 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13102422-13112421 Capsella rubella
Carub.0002s2511 10.0kb downstream 10.0kb downstream 11613 true scaffold_2: 13090809-13102421 Capsella rubella
Carub.0002s2511 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13090809-13100808 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376174 5261 Brassicaceae View MSA
123838606 5264 Brassicales-Malvales View MSA
124349215 5266 SBM View MSA
124244358 5268 Malvidae View MSA
124070753 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain