Gene : Carub.0002s2324 C. rubella v1.1

Defline:  (1 of 2) PTHR32002:SF6 - PROTEIN NLP4-RELATED Genomic Order:  2324
Name:  ? Carub.0002s2324 Secondary Identifier:  ? PAC:39245894

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2324 0.5kb upstream 0.5kb upstream 4155 true scaffold_2: 12293295-12297449 Capsella rubella
Carub.0002s2324 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12293295-12293794 Capsella rubella
Carub.0002s2324 0.5kb downstream 0.5kb downstream 4155 true scaffold_2: 12293795-12297949 Capsella rubella
Carub.0002s2324 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12297450-12297949 Capsella rubella
Carub.0002s2324 1.0kb upstream 1.0kb upstream 4655 true scaffold_2: 12292795-12297449 Capsella rubella
Carub.0002s2324 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12292795-12293794 Capsella rubella
Carub.0002s2324 1.0kb downstream 1.0kb downstream 4655 true scaffold_2: 12293795-12298449 Capsella rubella
Carub.0002s2324 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12297450-12298449 Capsella rubella
Carub.0002s2324 2.0kb upstream 2.0kb upstream 5655 true scaffold_2: 12291795-12297449 Capsella rubella
Carub.0002s2324 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12291795-12293794 Capsella rubella
Carub.0002s2324 2.0kb downstream 2.0kb downstream 5655 true scaffold_2: 12293795-12299449 Capsella rubella
Carub.0002s2324 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12297450-12299449 Capsella rubella
Carub.0002s2324 5.0kb upstream 5.0kb upstream 8655 true scaffold_2: 12288795-12297449 Capsella rubella
Carub.0002s2324 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12288795-12293794 Capsella rubella
Carub.0002s2324 5.0kb downstream 5.0kb downstream 8655 true scaffold_2: 12293795-12302449 Capsella rubella
Carub.0002s2324 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12297450-12302449 Capsella rubella
Carub.0002s2324 10.0kb upstream 10.0kb upstream 13655 true scaffold_2: 12283795-12297449 Capsella rubella
Carub.0002s2324 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12283795-12293794 Capsella rubella
Carub.0002s2324 10.0kb downstream 10.0kb downstream 13655 true scaffold_2: 12293795-12307449 Capsella rubella
Carub.0002s2324 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12297450-12307449 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371925 5261 Brassicaceae View MSA
123840676 5264 Brassicales-Malvales View MSA
124322768 5266 SBM View MSA
124251360 5268 Malvidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain