Gene : Carub.0002s2347 C. rubella v1.1
Defline:  (1 of 1) PTHR33921//PTHR33921:SF3 - FAMILY NOT NAMED // CALVIN CYCLE PROTEIN CP12-3, CHLOROPLASTIC Genomic Order:  2347
Name:  ? Carub.0002s2347 Secondary Identifier:  ? PAC:39243192
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2347 0.5kb upstream 0.5kb upstream 1133 true scaffold_2: 12394222-12395354 Capsella rubella
Carub.0002s2347 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12394222-12394721 Capsella rubella
Carub.0002s2347 0.5kb downstream 0.5kb downstream 1133 true scaffold_2: 12394722-12395854 Capsella rubella
Carub.0002s2347 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12395355-12395854 Capsella rubella
Carub.0002s2347 1.0kb upstream 1.0kb upstream 1633 true scaffold_2: 12393722-12395354 Capsella rubella
Carub.0002s2347 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12393722-12394721 Capsella rubella
Carub.0002s2347 1.0kb downstream 1.0kb downstream 1633 true scaffold_2: 12394722-12396354 Capsella rubella
Carub.0002s2347 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12395355-12396354 Capsella rubella
Carub.0002s2347 2.0kb upstream 2.0kb upstream 2633 true scaffold_2: 12392722-12395354 Capsella rubella
Carub.0002s2347 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12392722-12394721 Capsella rubella
Carub.0002s2347 2.0kb downstream 2.0kb downstream 2633 true scaffold_2: 12394722-12397354 Capsella rubella
Carub.0002s2347 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12395355-12397354 Capsella rubella
Carub.0002s2347 5.0kb upstream 5.0kb upstream 5633 true scaffold_2: 12389722-12395354 Capsella rubella
Carub.0002s2347 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12389722-12394721 Capsella rubella
Carub.0002s2347 5.0kb downstream 5.0kb downstream 5633 true scaffold_2: 12394722-12400354 Capsella rubella
Carub.0002s2347 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12395355-12400354 Capsella rubella
Carub.0002s2347 10.0kb upstream 10.0kb upstream 10633 true scaffold_2: 12384722-12395354 Capsella rubella
Carub.0002s2347 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12384722-12394721 Capsella rubella
Carub.0002s2347 10.0kb downstream 10.0kb downstream 10633 true scaffold_2: 12394722-12405354 Capsella rubella
Carub.0002s2347 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12395355-12405354 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360808 5261 Brassicaceae View MSA
123829669 5264 Brassicales-Malvales View MSA
124347812 5266 SBM View MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain