Gene : Carub.0006s0955 C. rubella v1.1
Defline:  (1 of 1) PTHR21512:SF5 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 Genomic Order:  955
Name:  ? Carub.0006s0955 Secondary Identifier:  ? PAC:39246825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0955 0.5kb upstream 0.5kb upstream 6387 true scaffold_6: 3459352-3465738 Capsella rubella
Carub.0006s0955 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3459352-3459851 Capsella rubella
Carub.0006s0955 0.5kb downstream 0.5kb downstream 6387 true scaffold_6: 3459852-3466238 Capsella rubella
Carub.0006s0955 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3465739-3466238 Capsella rubella
Carub.0006s0955 1.0kb upstream 1.0kb upstream 6887 true scaffold_6: 3458852-3465738 Capsella rubella
Carub.0006s0955 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3458852-3459851 Capsella rubella
Carub.0006s0955 1.0kb downstream 1.0kb downstream 6887 true scaffold_6: 3459852-3466738 Capsella rubella
Carub.0006s0955 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3465739-3466738 Capsella rubella
Carub.0006s0955 2.0kb upstream 2.0kb upstream 7887 true scaffold_6: 3457852-3465738 Capsella rubella
Carub.0006s0955 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3457852-3459851 Capsella rubella
Carub.0006s0955 2.0kb downstream 2.0kb downstream 7887 true scaffold_6: 3459852-3467738 Capsella rubella
Carub.0006s0955 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3465739-3467738 Capsella rubella
Carub.0006s0955 5.0kb upstream 5.0kb upstream 10887 true scaffold_6: 3454852-3465738 Capsella rubella
Carub.0006s0955 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3454852-3459851 Capsella rubella
Carub.0006s0955 5.0kb downstream 5.0kb downstream 10887 true scaffold_6: 3459852-3470738 Capsella rubella
Carub.0006s0955 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3465739-3470738 Capsella rubella
Carub.0006s0955 10.0kb upstream 10.0kb upstream 15887 true scaffold_6: 3449852-3465738 Capsella rubella
Carub.0006s0955 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3449852-3459851 Capsella rubella
Carub.0006s0955 10.0kb downstream 10.0kb downstream 15887 true scaffold_6: 3459852-3475738 Capsella rubella
Carub.0006s0955 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3465739-3475738 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361747 5261 Brassicaceae View MSA
123828745 5264 Brassicales-Malvales View MSA
124340740 5266 SBM View MSA
124242087 5268 Malvidae View MSA
124062014 5270 Rosid View MSA
123736425 5271 Pentapetalae View MSA
122786801 5272 Eudicot View MSA
122047010 5273 Angiosperm View MSA
121344972 5274 Embryophyte View MSA
123380135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain