Gene : Carub.0002s1987 C. rubella v1.1
Defline:  (1 of 4) PTHR22884//PTHR22884:SF383 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1-RELATED Genomic Order:  1987
Name:  ? Carub.0002s1987 Secondary Identifier:  ? PAC:39243031
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1987 0.5kb upstream 0.5kb upstream 3721 true scaffold_2: 11064425-11068145 Capsella rubella
Carub.0002s1987 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11064425-11064924 Capsella rubella
Carub.0002s1987 0.5kb downstream 0.5kb downstream 3721 true scaffold_2: 11064925-11068645 Capsella rubella
Carub.0002s1987 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11068146-11068645 Capsella rubella
Carub.0002s1987 1.0kb upstream 1.0kb upstream 4221 true scaffold_2: 11063925-11068145 Capsella rubella
Carub.0002s1987 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11063925-11064924 Capsella rubella
Carub.0002s1987 1.0kb downstream 1.0kb downstream 4221 true scaffold_2: 11064925-11069145 Capsella rubella
Carub.0002s1987 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11068146-11069145 Capsella rubella
Carub.0002s1987 2.0kb upstream 2.0kb upstream 5221 true scaffold_2: 11062925-11068145 Capsella rubella
Carub.0002s1987 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11062925-11064924 Capsella rubella
Carub.0002s1987 2.0kb downstream 2.0kb downstream 5221 true scaffold_2: 11064925-11070145 Capsella rubella
Carub.0002s1987 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11068146-11070145 Capsella rubella
Carub.0002s1987 5.0kb upstream 5.0kb upstream 8221 true scaffold_2: 11059925-11068145 Capsella rubella
Carub.0002s1987 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11059925-11064924 Capsella rubella
Carub.0002s1987 5.0kb downstream 5.0kb downstream 8221 true scaffold_2: 11064925-11073145 Capsella rubella
Carub.0002s1987 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11068146-11073145 Capsella rubella
Carub.0002s1987 10.0kb upstream 10.0kb upstream 13221 true scaffold_2: 11054925-11068145 Capsella rubella
Carub.0002s1987 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11054925-11064924 Capsella rubella
Carub.0002s1987 10.0kb downstream 10.0kb downstream 13221 true scaffold_2: 11064925-11078145 Capsella rubella
Carub.0002s1987 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11068146-11078145 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376482 5261 Brassicaceae View MSA
123838805 5264 Brassicales-Malvales View MSA
124336607 5266 SBM View MSA
124240886 5268 Malvidae View MSA
124071234 5270 Rosid View MSA
123749148 5271 Pentapetalae View MSA
122788746 5272 Eudicot View MSA
122041752 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350126 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain