Gene : Carub.0002s1998 C. rubella v1.1
Defline:  (1 of 2) PTHR19139:SF30 - AQUAPORIN TIP3-1-RELATED Genomic Order:  1998
Name:  ? Carub.0002s1998 Secondary Identifier:  ? PAC:39243384
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1998 0.5kb upstream 0.5kb upstream 1868 true scaffold_2: 11093788-11095655 Capsella rubella
Carub.0002s1998 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11093788-11094287 Capsella rubella
Carub.0002s1998 0.5kb downstream 0.5kb downstream 1868 true scaffold_2: 11094288-11096155 Capsella rubella
Carub.0002s1998 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11095656-11096155 Capsella rubella
Carub.0002s1998 1.0kb upstream 1.0kb upstream 2368 true scaffold_2: 11093288-11095655 Capsella rubella
Carub.0002s1998 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11093288-11094287 Capsella rubella
Carub.0002s1998 1.0kb downstream 1.0kb downstream 2368 true scaffold_2: 11094288-11096655 Capsella rubella
Carub.0002s1998 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11095656-11096655 Capsella rubella
Carub.0002s1998 2.0kb upstream 2.0kb upstream 3368 true scaffold_2: 11092288-11095655 Capsella rubella
Carub.0002s1998 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11092288-11094287 Capsella rubella
Carub.0002s1998 2.0kb downstream 2.0kb downstream 3368 true scaffold_2: 11094288-11097655 Capsella rubella
Carub.0002s1998 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11095656-11097655 Capsella rubella
Carub.0002s1998 5.0kb upstream 5.0kb upstream 6368 true scaffold_2: 11089288-11095655 Capsella rubella
Carub.0002s1998 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11089288-11094287 Capsella rubella
Carub.0002s1998 5.0kb downstream 5.0kb downstream 6368 true scaffold_2: 11094288-11100655 Capsella rubella
Carub.0002s1998 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11095656-11100655 Capsella rubella
Carub.0002s1998 10.0kb upstream 10.0kb upstream 11368 true scaffold_2: 11084288-11095655 Capsella rubella
Carub.0002s1998 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11084288-11094287 Capsella rubella
Carub.0002s1998 10.0kb downstream 10.0kb downstream 11368 true scaffold_2: 11094288-11105655 Capsella rubella
Carub.0002s1998 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11095656-11105655 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375647 5261 Brassicaceae View MSA
123838510 5264 Brassicales-Malvales View MSA
124344483 5266 SBM View MSA
124244047 5268 Malvidae View MSA
124064824 5270 Rosid View MSA
123744186 5271 Pentapetalae View MSA
122786235 5272 Eudicot View MSA
122044234 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain