Gene : Carub.0002s2249 C. rubella v1.1
Defline:  (1 of 3) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) Genomic Order:  2249
Name:  ? Carub.0002s2249 Secondary Identifier:  ? PAC:39245480
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2249 0.5kb upstream 0.5kb upstream 7291 true scaffold_2: 12035924-12043214 Capsella rubella
Carub.0002s2249 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12035924-12036423 Capsella rubella
Carub.0002s2249 0.5kb downstream 0.5kb downstream 7291 true scaffold_2: 12036424-12043714 Capsella rubella
Carub.0002s2249 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12043215-12043714 Capsella rubella
Carub.0002s2249 1.0kb upstream 1.0kb upstream 7791 true scaffold_2: 12035424-12043214 Capsella rubella
Carub.0002s2249 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12035424-12036423 Capsella rubella
Carub.0002s2249 1.0kb downstream 1.0kb downstream 7791 true scaffold_2: 12036424-12044214 Capsella rubella
Carub.0002s2249 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12043215-12044214 Capsella rubella
Carub.0002s2249 2.0kb upstream 2.0kb upstream 8791 true scaffold_2: 12034424-12043214 Capsella rubella
Carub.0002s2249 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12034424-12036423 Capsella rubella
Carub.0002s2249 2.0kb downstream 2.0kb downstream 8791 true scaffold_2: 12036424-12045214 Capsella rubella
Carub.0002s2249 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12043215-12045214 Capsella rubella
Carub.0002s2249 5.0kb upstream 5.0kb upstream 11791 true scaffold_2: 12031424-12043214 Capsella rubella
Carub.0002s2249 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12031424-12036423 Capsella rubella
Carub.0002s2249 5.0kb downstream 5.0kb downstream 11791 true scaffold_2: 12036424-12048214 Capsella rubella
Carub.0002s2249 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12043215-12048214 Capsella rubella
Carub.0002s2249 10.0kb upstream 10.0kb upstream 16791 true scaffold_2: 12026424-12043214 Capsella rubella
Carub.0002s2249 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12026424-12036423 Capsella rubella
Carub.0002s2249 10.0kb downstream 10.0kb downstream 16791 true scaffold_2: 12036424-12053214 Capsella rubella
Carub.0002s2249 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12043215-12053214 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026403 5273 Angiosperm View MSA
122376864 5261 Brassicaceae View MSA
123839945 5264 Brassicales-Malvales View MSA
124339631 5266 SBM View MSA
124247818 5268 Malvidae View MSA
124066178 5270 Rosid View MSA
123742031 5271 Pentapetalae View MSA
122789000 5272 Eudicot View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain