Protein Family : XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 123429022

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  246

246 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30055.t000094 (1 of 3) PTHR12341:SF30 - 5'-3' EXORIBONUCLEASE 2-RELATED R. communis v0.1 6150   30055: 460728-466877
30073.t000023 (1 of 1) PTHR12341//PTHR12341:SF38 - 5'->3' EXORIBONUCLEASE R. communis v0.1 13151   30073: 151027-164177
30128.t000098 (1 of 2) 3.4.23.16 - HIV-1 retropepsin / Human immunodeficiency virus type 1 protease R. communis v0.1 9393   30128: 235782-245174
30170.t000579 (1 of 3) PTHR12341:SF30 - 5'-3' EXORIBONUCLEASE 2-RELATED R. communis v0.1 9366   30170: 3291207-3300572
Cucsa.133490 (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE C. sativus v1.0 10434   scaffold01037: 1166265-1176698
Cucsa.033870 (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE C. sativus v1.0 22775   scaffold00438: 400555-423329
orange1.1g002147m.g (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE C. sinensis v1.1 8995   scaffold00144: 63619-72613
orange1.1g001209m.g (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE C. sinensis v1.1 9583   scaffold00002: 3688495-3698077
AT5G42540 (1 of 3) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) A. thaliana TAIR10 XRN2 7413   Chr5: 17007389-17014801
AT1G54490 (1 of 3) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) A. thaliana TAIR10 XRN4 6726   Chr1: 20350191-20356916
AT1G75660 (1 of 3) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) A. thaliana TAIR10 XRN3 6971   Chr1: 28408147-28415117
Thhalv10009553m.g (1 of 3) PTHR12341 - 5'->3' EXORIBONUCLEASE E. salsugineum v1.0 5991   scaffold_5: 10573787-10579777
Thhalv10023239m.g (1 of 3) PTHR12341 - 5'->3' EXORIBONUCLEASE E. salsugineum v1.0 6499   scaffold_8: 12992094-12998592
Thhalv10018062m.g (1 of 3) PTHR12341 - 5'->3' EXORIBONUCLEASE E. salsugineum v1.0 6514   scaffold_9: 2153010-2159523
Ciclev10000168m.g (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE C. clementina v1.0 9512   scaffold_5: 30641622-30651133
Ciclev10000087m.g (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE C. clementina v1.0 9602   scaffold_5: 41811142-41820743
Lus10024327.g (1 of 6) PF00098//PF03159 - Zinc knuckle (zf-CCHC) // XRN 5'-3' exonuclease N-terminus (XRN_N) L. usitatissimum v1.0 6366   scaffold16: 389144-395509
Lus10015946.g (1 of 4) 3.4.23.16 - HIV-1 retropepsin / Human immunodeficiency virus type 1 protease L. usitatissimum v1.0 8301   scaffold201: 555582-563882
Lus10012434.g (1 of 6) PF00098//PF03159 - Zinc knuckle (zf-CCHC) // XRN 5'-3' exonuclease N-terminus (XRN_N) L. usitatissimum v1.0 6659   scaffold248: 395559-402217
Lus10020397.g (1 of 13) PTHR12341:SF30 - 5'-3' EXORIBONUCLEASE 2-RELATED L. usitatissimum v1.0 6403   scaffold641: 719832-726234
Lus10004119.g (1 of 4) 3.4.23.16 - HIV-1 retropepsin / Human immunodeficiency virus type 1 protease L. usitatissimum v1.0 4676   scaffold709: 44957-49632
Lus10013326.g (1 of 13) PTHR12341:SF30 - 5'-3' EXORIBONUCLEASE 2-RELATED L. usitatissimum v1.0 4949   scaffold812: 152579-157527
Lus10013328.g (1 of 13) PTHR12341:SF30 - 5'-3' EXORIBONUCLEASE 2-RELATED L. usitatissimum v1.0 4092   scaffold812: 160199-164290
Lus10000941.g (1 of 4) 3.4.23.16 - HIV-1 retropepsin / Human immunodeficiency virus type 1 protease L. usitatissimum v1.0 4649   scaffold1098: 34233-38881
Gorai.013G257000 (1 of 5) PF03159 - XRN 5'-3' exonuclease N-terminus (XRN_N) G. raimondii v2.1 5489   Chr13: 57302774-57308262
Gorai.013G121900 (1 of 4) PF00098//PF03159 - Zinc knuckle (zf-CCHC) // XRN 5'-3' exonuclease N-terminus (XRN_N) G. raimondii v2.1 11711   Chr13: 31194175-31205885
Gorai.009G270300 (1 of 4) PF00098//PF03159 - Zinc knuckle (zf-CCHC) // XRN 5'-3' exonuclease N-terminus (XRN_N) G. raimondii v2.1 7837   Chr09: 22544538-22552374
Gorai.007G285900 (1 of 4) PF00098//PF03159 - Zinc knuckle (zf-CCHC) // XRN 5'-3' exonuclease N-terminus (XRN_N) G. raimondii v2.1 8998   Chr07: 49009595-49018592
Genemark1.7550_g (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE C. subellipsoidea C-169 v2.0 5195   scaffold_18: 1269777-1274971
gm1.6732_g (1 of 3) PTHR12341 - 5'->3' EXORIBONUCLEASE M. pusilla CCMP1545 v3.0 4737   scaffold_11: 496116-500852

246 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.033870.1 C. sativus v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 2 5275 Viridiplantae
Cucsa.133490.1 C. sativus v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 2 5275 Viridiplantae
AT1G75660.1 A. thaliana TAIR10 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
AT1G54490.1 A. thaliana TAIR10 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Thhalv10018062m E. salsugineum v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Lus10020397 L. usitatissimum v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 8 5275 Viridiplantae
Lus10004119 L. usitatissimum v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 8 5275 Viridiplantae
Lus10012434 L. usitatissimum v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 8 5275 Viridiplantae
Gorai.013G257000.1 G. raimondii v2.1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 4 5275 Viridiplantae
Gorai.013G121900.1 G. raimondii v2.1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 4 5275 Viridiplantae
189611 M. pusilla CCMP1545 v3.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 2 5275 Viridiplantae
58521 C. subellipsoidea C-169 v2.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 1 5275 Viridiplantae
18607 O. lucimarinus v2.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 1 5275 Viridiplantae
Araha.6463s0001.1.p A. halleri v1.1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Araha.10772s0004.1.p A. halleri v1.1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Cagra.0247s0001.1.p C. grandiflora v1.1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Cagra.0799s0036.1.p C. grandiflora v1.1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Migut.D02397.1.p M. guttatus v2.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Glyma.03G245000.1.p G. max Wm82.a2.v1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 7 5275 Viridiplantae
Glyma.14G218000.1.p G. max Wm82.a2.v1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 7 5275 Viridiplantae
Glyma.12G093500.1.p G. max Wm82.a2.v1 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 7 5275 Viridiplantae
Brara.F03844.1.p B. rapa FPsc v1.3 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Brara.G03366.1.p B. rapa FPsc v1.3 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Bostr.13404s0023.1.p B. stricta v1.2 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
Cre03.g152100.t1.2 C. reinhardtii v5.6 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3 5275 Viridiplantae
SapurV1A.0025s0540.1.p S. purpurea v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 5 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00004.29 A. trichopoda v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 2 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00491.1 A. trichopoda v1.0 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 2 5275 Viridiplantae
Traes_2AS_362BBDD74.1 T. aestivum v2.2 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 5 5275 Viridiplantae
Traes_5DL_AD4335AE2.2 T. aestivum v2.2 123429022 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 5 5275 Viridiplantae