Gene : XRN3 A. thaliana TAIR10
Primary Identifier:  ? AT1G75660 Defline:  (1 of 3) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1)
Genomic Order:  6530 Name:  ? AT1G75660
Secondary Identifier:  ? PAC:19653481
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75660 0.5kb upstream 0.5kb upstream 7471 true Chr1: 28407647-28415117 Arabidopsis thaliana
AT1G75660 0.5kb upstream 0.5kb upstream 500 false Chr1: 28407647-28408146 Arabidopsis thaliana
AT1G75660 0.5kb downstream 0.5kb downstream 7471 true Chr1: 28408147-28415617 Arabidopsis thaliana
AT1G75660 0.5kb downstream 0.5kb downstream 500 false Chr1: 28415118-28415617 Arabidopsis thaliana
AT1G75660 1.0kb upstream 1.0kb upstream 7971 true Chr1: 28407147-28415117 Arabidopsis thaliana
AT1G75660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28407147-28408146 Arabidopsis thaliana
AT1G75660 1.0kb downstream 1.0kb downstream 7971 true Chr1: 28408147-28416117 Arabidopsis thaliana
AT1G75660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28415118-28416117 Arabidopsis thaliana
AT1G75660 2.0kb upstream 2.0kb upstream 8971 true Chr1: 28406147-28415117 Arabidopsis thaliana
AT1G75660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28406147-28408146 Arabidopsis thaliana
AT1G75660 2.0kb downstream 2.0kb downstream 8971 true Chr1: 28408147-28417117 Arabidopsis thaliana
AT1G75660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28415118-28417117 Arabidopsis thaliana
AT1G75660 5.0kb upstream 5.0kb upstream 11971 true Chr1: 28403147-28415117 Arabidopsis thaliana
AT1G75660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28403147-28408146 Arabidopsis thaliana
AT1G75660 5.0kb downstream 5.0kb downstream 11971 true Chr1: 28408147-28420117 Arabidopsis thaliana
AT1G75660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28415118-28420117 Arabidopsis thaliana
AT1G75660 10.0kb upstream 10.0kb upstream 16971 true Chr1: 28398147-28415117 Arabidopsis thaliana
AT1G75660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28398147-28408146 Arabidopsis thaliana
AT1G75660 10.0kb downstream 10.0kb downstream 16971 true Chr1: 28408147-28425117 Arabidopsis thaliana
AT1G75660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28415118-28425117 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026403 5273 Angiosperm View MSA
122376864 5261 Brassicaceae View MSA
123839945 5264 Brassicales-Malvales View MSA
124339631 5266 SBM View MSA
124247818 5268 Malvidae View MSA
124066178 5270 Rosid View MSA
123742031 5271 Pentapetalae View MSA
122789000 5272 Eudicot View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.154        
cufflinks 18.073        
cufflinks 10.729       Low
cufflinks 19.921       High
cufflinks 11.719        
cufflinks 16.486        

0 Strain