Gene : Lus10015946.g L. usitatissimum v1.0
Defline:  (1 of 4) 3.4.23.16 - HIV-1 retropepsin / Human immunodeficiency virus type 1 protease Genomic Order:  40
Name:  ? Lus10015946.g Secondary Identifier:  ? PAC:23143782
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10015946.g 0.5kb upstream 0.5kb upstream 8801 true scaffold201: 555582-564382 Linum usitatissimum
Lus10015946.g 0.5kb upstream 0.5kb upstream 500 false scaffold201: 563883-564382 Linum usitatissimum
Lus10015946.g 0.5kb downstream 0.5kb downstream 8801 true scaffold201: 555082-563882 Linum usitatissimum
Lus10015946.g 0.5kb downstream 0.5kb downstream 500 false scaffold201: 555082-555581 Linum usitatissimum
Lus10015946.g 1.0kb upstream 1.0kb upstream 9301 true scaffold201: 555582-564882 Linum usitatissimum
Lus10015946.g 1.0kb upstream 1.0kb upstream 1000 false scaffold201: 563883-564882 Linum usitatissimum
Lus10015946.g 1.0kb downstream 1.0kb downstream 9301 true scaffold201: 554582-563882 Linum usitatissimum
Lus10015946.g 1.0kb downstream 1.0kb downstream 1000 false scaffold201: 554582-555581 Linum usitatissimum
Lus10015946.g 2.0kb upstream 2.0kb upstream 10301 true scaffold201: 555582-565882 Linum usitatissimum
Lus10015946.g 2.0kb upstream 2.0kb upstream 2000 false scaffold201: 563883-565882 Linum usitatissimum
Lus10015946.g 2.0kb downstream 2.0kb downstream 10301 true scaffold201: 553582-563882 Linum usitatissimum
Lus10015946.g 2.0kb downstream 2.0kb downstream 2000 false scaffold201: 553582-555581 Linum usitatissimum
Lus10015946.g 5.0kb upstream 5.0kb upstream 13301 true scaffold201: 555582-568882 Linum usitatissimum
Lus10015946.g 5.0kb upstream 5.0kb upstream 5000 false scaffold201: 563883-568882 Linum usitatissimum
Lus10015946.g 5.0kb downstream 5.0kb downstream 13301 true scaffold201: 550582-563882 Linum usitatissimum
Lus10015946.g 5.0kb downstream 5.0kb downstream 5000 false scaffold201: 550582-555581 Linum usitatissimum
Lus10015946.g 10.0kb upstream 10.0kb upstream 18301 true scaffold201: 555582-573882 Linum usitatissimum
Lus10015946.g 10.0kb upstream 10.0kb upstream 10000 false scaffold201: 563883-573882 Linum usitatissimum
Lus10015946.g 10.0kb downstream 10.0kb downstream 18301 true scaffold201: 545582-563882 Linum usitatissimum
Lus10015946.g 10.0kb downstream 10.0kb downstream 10000 false scaffold201: 545582-555581 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122417355 5262 Malpighiales Singleton cluster - no MSA
124248823 5268 Malvidae View MSA
124065643 5270 Rosid View MSA
123737984 5271 Pentapetalae View MSA
122795670 5272 Eudicot View MSA
122042624 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain