Gene : Lus10000941.g L. usitatissimum v1.0
Defline:  (1 of 4) 3.4.23.16 - HIV-1 retropepsin / Human immunodeficiency virus type 1 protease Genomic Order:  8
Name:  ? Lus10000941.g Secondary Identifier:  ? PAC:23172923
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10000941.g 0.5kb upstream 0.5kb upstream 5149 true scaffold1098: 34233-39381 Linum usitatissimum
Lus10000941.g 0.5kb upstream 0.5kb upstream 500 false scaffold1098: 38882-39381 Linum usitatissimum
Lus10000941.g 0.5kb downstream 0.5kb downstream 5149 true scaffold1098: 33733-38881 Linum usitatissimum
Lus10000941.g 0.5kb downstream 0.5kb downstream 500 false scaffold1098: 33733-34232 Linum usitatissimum
Lus10000941.g 1.0kb upstream 1.0kb upstream 5649 true scaffold1098: 34233-39881 Linum usitatissimum
Lus10000941.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1098: 38882-39881 Linum usitatissimum
Lus10000941.g 1.0kb downstream 1.0kb downstream 5649 true scaffold1098: 33233-38881 Linum usitatissimum
Lus10000941.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1098: 33233-34232 Linum usitatissimum
Lus10000941.g 2.0kb upstream 2.0kb upstream 6649 true scaffold1098: 34233-40881 Linum usitatissimum
Lus10000941.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1098: 38882-40881 Linum usitatissimum
Lus10000941.g 2.0kb downstream 2.0kb downstream 6649 true scaffold1098: 32233-38881 Linum usitatissimum
Lus10000941.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1098: 32233-34232 Linum usitatissimum
Lus10000941.g 5.0kb upstream 5.0kb upstream 9649 true scaffold1098: 34233-43881 Linum usitatissimum
Lus10000941.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1098: 38882-43881 Linum usitatissimum
Lus10000941.g 5.0kb downstream 5.0kb downstream 9649 true scaffold1098: 29233-38881 Linum usitatissimum
Lus10000941.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1098: 29233-34232 Linum usitatissimum
Lus10000941.g 10.0kb upstream 10.0kb upstream 14649 true scaffold1098: 34233-48881 Linum usitatissimum
Lus10000941.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1098: 38882-48881 Linum usitatissimum
Lus10000941.g 10.0kb downstream 10.0kb downstream 14649 true scaffold1098: 24233-38881 Linum usitatissimum
Lus10000941.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1098: 24233-34232 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457385 5262 Malpighiales View MSA
124248823 5268 Malvidae View MSA
124065643 5270 Rosid View MSA
123737984 5271 Pentapetalae View MSA
122795670 5272 Eudicot View MSA
122042624 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain