Gene : Carub.0008s1124 C. rubella v1.1
Defline:  (1 of 146) PF00847 - AP2 domain (AP2) Genomic Order:  1124
Name:  ? Carub.0008s1124 Secondary Identifier:  ? PAC:39252450
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1124 0.5kb upstream 0.5kb upstream 1175 true scaffold_8: 6789562-6790736 Capsella rubella
Carub.0008s1124 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6790237-6790736 Capsella rubella
Carub.0008s1124 0.5kb downstream 0.5kb downstream 1175 true scaffold_8: 6789062-6790236 Capsella rubella
Carub.0008s1124 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6789062-6789561 Capsella rubella
Carub.0008s1124 1.0kb upstream 1.0kb upstream 1675 true scaffold_8: 6789562-6791236 Capsella rubella
Carub.0008s1124 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6790237-6791236 Capsella rubella
Carub.0008s1124 1.0kb downstream 1.0kb downstream 1675 true scaffold_8: 6788562-6790236 Capsella rubella
Carub.0008s1124 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6788562-6789561 Capsella rubella
Carub.0008s1124 2.0kb upstream 2.0kb upstream 2675 true scaffold_8: 6789562-6792236 Capsella rubella
Carub.0008s1124 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6790237-6792236 Capsella rubella
Carub.0008s1124 2.0kb downstream 2.0kb downstream 2675 true scaffold_8: 6787562-6790236 Capsella rubella
Carub.0008s1124 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6787562-6789561 Capsella rubella
Carub.0008s1124 5.0kb upstream 5.0kb upstream 5675 true scaffold_8: 6789562-6795236 Capsella rubella
Carub.0008s1124 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6790237-6795236 Capsella rubella
Carub.0008s1124 5.0kb downstream 5.0kb downstream 5675 true scaffold_8: 6784562-6790236 Capsella rubella
Carub.0008s1124 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6784562-6789561 Capsella rubella
Carub.0008s1124 10.0kb upstream 10.0kb upstream 10675 true scaffold_8: 6789562-6800236 Capsella rubella
Carub.0008s1124 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6790237-6800236 Capsella rubella
Carub.0008s1124 10.0kb downstream 10.0kb downstream 10675 true scaffold_8: 6779562-6790236 Capsella rubella
Carub.0008s1124 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6779562-6789561 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378491 5261 Brassicaceae View MSA
123837459 5264 Brassicales-Malvales View MSA
124350301 5266 SBM View MSA
124248805 5268 Malvidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain