Gene : Carub.0008s1149 C. rubella v1.1
Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  1149
Name:  ? Carub.0008s1149 Secondary Identifier:  ? PAC:39252526
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1149 0.5kb upstream 0.5kb upstream 4148 true scaffold_8: 6876059-6880206 Capsella rubella
Carub.0008s1149 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6876059-6876558 Capsella rubella
Carub.0008s1149 0.5kb downstream 0.5kb downstream 4148 true scaffold_8: 6876559-6880706 Capsella rubella
Carub.0008s1149 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6880207-6880706 Capsella rubella
Carub.0008s1149 1.0kb upstream 1.0kb upstream 4648 true scaffold_8: 6875559-6880206 Capsella rubella
Carub.0008s1149 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6875559-6876558 Capsella rubella
Carub.0008s1149 1.0kb downstream 1.0kb downstream 4648 true scaffold_8: 6876559-6881206 Capsella rubella
Carub.0008s1149 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6880207-6881206 Capsella rubella
Carub.0008s1149 2.0kb upstream 2.0kb upstream 5648 true scaffold_8: 6874559-6880206 Capsella rubella
Carub.0008s1149 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6874559-6876558 Capsella rubella
Carub.0008s1149 2.0kb downstream 2.0kb downstream 5648 true scaffold_8: 6876559-6882206 Capsella rubella
Carub.0008s1149 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6880207-6882206 Capsella rubella
Carub.0008s1149 5.0kb upstream 5.0kb upstream 8648 true scaffold_8: 6871559-6880206 Capsella rubella
Carub.0008s1149 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6871559-6876558 Capsella rubella
Carub.0008s1149 5.0kb downstream 5.0kb downstream 8648 true scaffold_8: 6876559-6885206 Capsella rubella
Carub.0008s1149 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6880207-6885206 Capsella rubella
Carub.0008s1149 10.0kb upstream 10.0kb upstream 13648 true scaffold_8: 6866559-6880206 Capsella rubella
Carub.0008s1149 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6866559-6876558 Capsella rubella
Carub.0008s1149 10.0kb downstream 10.0kb downstream 13648 true scaffold_8: 6876559-6890206 Capsella rubella
Carub.0008s1149 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6880207-6890206 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369387 5261 Brassicaceae View MSA
123834936 5264 Brassicales-Malvales View MSA
124342221 5266 SBM View MSA
124250650 5268 Malvidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain