Gene : Carub.0008s1156 C. rubella v1.1
Defline:  (1 of 4) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  1156
Name:  ? Carub.0008s1156 Secondary Identifier:  ? PAC:39251457
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1156 0.5kb upstream 0.5kb upstream 1118 true scaffold_8: 6905576-6906693 Capsella rubella
Carub.0008s1156 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6905576-6906075 Capsella rubella
Carub.0008s1156 0.5kb downstream 0.5kb downstream 1118 true scaffold_8: 6906076-6907193 Capsella rubella
Carub.0008s1156 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6906694-6907193 Capsella rubella
Carub.0008s1156 1.0kb upstream 1.0kb upstream 1618 true scaffold_8: 6905076-6906693 Capsella rubella
Carub.0008s1156 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6905076-6906075 Capsella rubella
Carub.0008s1156 1.0kb downstream 1.0kb downstream 1618 true scaffold_8: 6906076-6907693 Capsella rubella
Carub.0008s1156 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6906694-6907693 Capsella rubella
Carub.0008s1156 2.0kb upstream 2.0kb upstream 2618 true scaffold_8: 6904076-6906693 Capsella rubella
Carub.0008s1156 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6904076-6906075 Capsella rubella
Carub.0008s1156 2.0kb downstream 2.0kb downstream 2618 true scaffold_8: 6906076-6908693 Capsella rubella
Carub.0008s1156 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6906694-6908693 Capsella rubella
Carub.0008s1156 5.0kb upstream 5.0kb upstream 5618 true scaffold_8: 6901076-6906693 Capsella rubella
Carub.0008s1156 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6901076-6906075 Capsella rubella
Carub.0008s1156 5.0kb downstream 5.0kb downstream 5618 true scaffold_8: 6906076-6911693 Capsella rubella
Carub.0008s1156 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6906694-6911693 Capsella rubella
Carub.0008s1156 10.0kb upstream 10.0kb upstream 10618 true scaffold_8: 6896076-6906693 Capsella rubella
Carub.0008s1156 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6896076-6906075 Capsella rubella
Carub.0008s1156 10.0kb downstream 10.0kb downstream 10618 true scaffold_8: 6906076-6916693 Capsella rubella
Carub.0008s1156 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6906694-6916693 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370739 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain