Gene : Carub.0008s0496 C. rubella v1.1
Defline:  (1 of 4) PTHR22838 - WD REPEAT PROTEIN 26-RELATED Genomic Order:  496
Name:  ? Carub.0008s0496 Secondary Identifier:  ? PAC:39250669
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0496 0.5kb upstream 0.5kb upstream 3455 true scaffold_8: 2162913-2166367 Capsella rubella
Carub.0008s0496 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2165868-2166367 Capsella rubella
Carub.0008s0496 0.5kb downstream 0.5kb downstream 3455 true scaffold_8: 2162413-2165867 Capsella rubella
Carub.0008s0496 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2162413-2162912 Capsella rubella
Carub.0008s0496 1.0kb upstream 1.0kb upstream 3955 true scaffold_8: 2162913-2166867 Capsella rubella
Carub.0008s0496 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2165868-2166867 Capsella rubella
Carub.0008s0496 1.0kb downstream 1.0kb downstream 3955 true scaffold_8: 2161913-2165867 Capsella rubella
Carub.0008s0496 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2161913-2162912 Capsella rubella
Carub.0008s0496 2.0kb upstream 2.0kb upstream 4955 true scaffold_8: 2162913-2167867 Capsella rubella
Carub.0008s0496 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2165868-2167867 Capsella rubella
Carub.0008s0496 2.0kb downstream 2.0kb downstream 4955 true scaffold_8: 2160913-2165867 Capsella rubella
Carub.0008s0496 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2160913-2162912 Capsella rubella
Carub.0008s0496 5.0kb upstream 5.0kb upstream 7955 true scaffold_8: 2162913-2170867 Capsella rubella
Carub.0008s0496 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2165868-2170867 Capsella rubella
Carub.0008s0496 5.0kb downstream 5.0kb downstream 7955 true scaffold_8: 2157913-2165867 Capsella rubella
Carub.0008s0496 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2157913-2162912 Capsella rubella
Carub.0008s0496 10.0kb upstream 10.0kb upstream 12955 true scaffold_8: 2162913-2175867 Capsella rubella
Carub.0008s0496 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2165868-2175867 Capsella rubella
Carub.0008s0496 10.0kb downstream 10.0kb downstream 12955 true scaffold_8: 2152913-2165867 Capsella rubella
Carub.0008s0496 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2152913-2162912 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372007 5261 Brassicaceae View MSA
123836023 5264 Brassicales-Malvales View MSA
124340880 5266 SBM View MSA
124244337 5268 Malvidae View MSA
124068172 5270 Rosid View MSA
123740658 5271 Pentapetalae View MSA
122788774 5272 Eudicot View MSA
122043991 5273 Angiosperm View MSA
121310222 5274 Embryophyte View MSA
123426468 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain