Gene : Carub.0008s0585 C. rubella v1.1

Defline:  (1 of 3) PTHR21493//PTHR21493:SF104 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  585
Name:  ? Carub.0008s0585 Secondary Identifier:  ? PAC:39251397

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0585 0.5kb upstream 0.5kb upstream 3524 true scaffold_8: 2600844-2604367 Capsella rubella
Carub.0008s0585 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2600844-2601343 Capsella rubella
Carub.0008s0585 0.5kb downstream 0.5kb downstream 3524 true scaffold_8: 2601344-2604867 Capsella rubella
Carub.0008s0585 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2604368-2604867 Capsella rubella
Carub.0008s0585 1.0kb upstream 1.0kb upstream 4024 true scaffold_8: 2600344-2604367 Capsella rubella
Carub.0008s0585 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2600344-2601343 Capsella rubella
Carub.0008s0585 1.0kb downstream 1.0kb downstream 4024 true scaffold_8: 2601344-2605367 Capsella rubella
Carub.0008s0585 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2604368-2605367 Capsella rubella
Carub.0008s0585 2.0kb upstream 2.0kb upstream 5024 true scaffold_8: 2599344-2604367 Capsella rubella
Carub.0008s0585 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2599344-2601343 Capsella rubella
Carub.0008s0585 2.0kb downstream 2.0kb downstream 5024 true scaffold_8: 2601344-2606367 Capsella rubella
Carub.0008s0585 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2604368-2606367 Capsella rubella
Carub.0008s0585 5.0kb upstream 5.0kb upstream 8024 true scaffold_8: 2596344-2604367 Capsella rubella
Carub.0008s0585 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2596344-2601343 Capsella rubella
Carub.0008s0585 5.0kb downstream 5.0kb downstream 8024 true scaffold_8: 2601344-2609367 Capsella rubella
Carub.0008s0585 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2604368-2609367 Capsella rubella
Carub.0008s0585 10.0kb upstream 10.0kb upstream 13024 true scaffold_8: 2591344-2604367 Capsella rubella
Carub.0008s0585 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2591344-2601343 Capsella rubella
Carub.0008s0585 10.0kb downstream 10.0kb downstream 13024 true scaffold_8: 2601344-2614367 Capsella rubella
Carub.0008s0585 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2604368-2614367 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369389 5261 Brassicaceae View MSA
123828194 5264 Brassicales-Malvales View MSA
124345442 5266 SBM View MSA
124242936 5268 Malvidae View MSA
124069453 5270 Rosid View MSA
123746073 5271 Pentapetalae View MSA
122791572 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain