Gene : Carub.0008s1079 C. rubella v1.1
Defline:  (1 of 4) PTHR10791//PTHR10791:SF65 - RAG1-ACTIVATING PROTEIN 1 // BIDIRECTIONAL SUGAR TRANSPORTER SWEET11-RELATED Genomic Order:  1079
Name:  ? Carub.0008s1079 Secondary Identifier:  ? PAC:39251312
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1079 0.5kb upstream 0.5kb upstream 2718 true scaffold_8: 6589079-6591796 Capsella rubella
Carub.0008s1079 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6591297-6591796 Capsella rubella
Carub.0008s1079 0.5kb downstream 0.5kb downstream 2718 true scaffold_8: 6588579-6591296 Capsella rubella
Carub.0008s1079 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6588579-6589078 Capsella rubella
Carub.0008s1079 1.0kb upstream 1.0kb upstream 3218 true scaffold_8: 6589079-6592296 Capsella rubella
Carub.0008s1079 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6591297-6592296 Capsella rubella
Carub.0008s1079 1.0kb downstream 1.0kb downstream 3218 true scaffold_8: 6588079-6591296 Capsella rubella
Carub.0008s1079 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6588079-6589078 Capsella rubella
Carub.0008s1079 2.0kb upstream 2.0kb upstream 4218 true scaffold_8: 6589079-6593296 Capsella rubella
Carub.0008s1079 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6591297-6593296 Capsella rubella
Carub.0008s1079 2.0kb downstream 2.0kb downstream 4218 true scaffold_8: 6587079-6591296 Capsella rubella
Carub.0008s1079 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6587079-6589078 Capsella rubella
Carub.0008s1079 5.0kb upstream 5.0kb upstream 7218 true scaffold_8: 6589079-6596296 Capsella rubella
Carub.0008s1079 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6591297-6596296 Capsella rubella
Carub.0008s1079 5.0kb downstream 5.0kb downstream 7218 true scaffold_8: 6584079-6591296 Capsella rubella
Carub.0008s1079 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6584079-6589078 Capsella rubella
Carub.0008s1079 10.0kb upstream 10.0kb upstream 12218 true scaffold_8: 6589079-6601296 Capsella rubella
Carub.0008s1079 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6591297-6601296 Capsella rubella
Carub.0008s1079 10.0kb downstream 10.0kb downstream 12218 true scaffold_8: 6579079-6591296 Capsella rubella
Carub.0008s1079 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6579079-6589078 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360989 5261 Brassicaceae View MSA
123836013 5264 Brassicales-Malvales View MSA
124322123 5266 SBM View MSA
124253102 5268 Malvidae View MSA
124071404 5270 Rosid View MSA
123751761 5271 Pentapetalae View MSA
122795579 5272 Eudicot View MSA
122043029 5273 Angiosperm View MSA
121310066 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain