Gene : Carub.0006s0836 C. rubella v1.1
Defline:  (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) Genomic Order:  836
Name:  ? Carub.0006s0836 Secondary Identifier:  ? PAC:39246740
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0836 0.5kb upstream 0.5kb upstream 1932 true scaffold_6: 3041746-3043677 Capsella rubella
Carub.0006s0836 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3041746-3042245 Capsella rubella
Carub.0006s0836 0.5kb downstream 0.5kb downstream 1932 true scaffold_6: 3042246-3044177 Capsella rubella
Carub.0006s0836 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3043678-3044177 Capsella rubella
Carub.0006s0836 1.0kb upstream 1.0kb upstream 2432 true scaffold_6: 3041246-3043677 Capsella rubella
Carub.0006s0836 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3041246-3042245 Capsella rubella
Carub.0006s0836 1.0kb downstream 1.0kb downstream 2432 true scaffold_6: 3042246-3044677 Capsella rubella
Carub.0006s0836 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3043678-3044677 Capsella rubella
Carub.0006s0836 2.0kb upstream 2.0kb upstream 3432 true scaffold_6: 3040246-3043677 Capsella rubella
Carub.0006s0836 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3040246-3042245 Capsella rubella
Carub.0006s0836 2.0kb downstream 2.0kb downstream 3432 true scaffold_6: 3042246-3045677 Capsella rubella
Carub.0006s0836 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3043678-3045677 Capsella rubella
Carub.0006s0836 5.0kb upstream 5.0kb upstream 6432 true scaffold_6: 3037246-3043677 Capsella rubella
Carub.0006s0836 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3037246-3042245 Capsella rubella
Carub.0006s0836 5.0kb downstream 5.0kb downstream 6432 true scaffold_6: 3042246-3048677 Capsella rubella
Carub.0006s0836 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3043678-3048677 Capsella rubella
Carub.0006s0836 10.0kb upstream 10.0kb upstream 11432 true scaffold_6: 3032246-3043677 Capsella rubella
Carub.0006s0836 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3032246-3042245 Capsella rubella
Carub.0006s0836 10.0kb downstream 10.0kb downstream 11432 true scaffold_6: 3042246-3053677 Capsella rubella
Carub.0006s0836 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3043678-3053677 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369881 5261 Brassicaceae View MSA
123833320 5264 Brassicales-Malvales View MSA
124337190 5266 SBM View MSA
124242479 5268 Malvidae View MSA
124060840 5270 Rosid View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain