Gene : Carub.0008s0864 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  864
Name:  ? Carub.0008s0864 Secondary Identifier:  ? PAC:39252988
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0864 0.5kb upstream 0.5kb upstream 2441 true scaffold_8: 5654545-5656985 Capsella rubella
Carub.0008s0864 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5656486-5656985 Capsella rubella
Carub.0008s0864 0.5kb downstream 0.5kb downstream 2441 true scaffold_8: 5654045-5656485 Capsella rubella
Carub.0008s0864 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5654045-5654544 Capsella rubella
Carub.0008s0864 1.0kb upstream 1.0kb upstream 2941 true scaffold_8: 5654545-5657485 Capsella rubella
Carub.0008s0864 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5656486-5657485 Capsella rubella
Carub.0008s0864 1.0kb downstream 1.0kb downstream 2941 true scaffold_8: 5653545-5656485 Capsella rubella
Carub.0008s0864 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5653545-5654544 Capsella rubella
Carub.0008s0864 2.0kb upstream 2.0kb upstream 3941 true scaffold_8: 5654545-5658485 Capsella rubella
Carub.0008s0864 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5656486-5658485 Capsella rubella
Carub.0008s0864 2.0kb downstream 2.0kb downstream 3941 true scaffold_8: 5652545-5656485 Capsella rubella
Carub.0008s0864 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5652545-5654544 Capsella rubella
Carub.0008s0864 5.0kb upstream 5.0kb upstream 6941 true scaffold_8: 5654545-5661485 Capsella rubella
Carub.0008s0864 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5656486-5661485 Capsella rubella
Carub.0008s0864 5.0kb downstream 5.0kb downstream 6941 true scaffold_8: 5649545-5656485 Capsella rubella
Carub.0008s0864 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5649545-5654544 Capsella rubella
Carub.0008s0864 10.0kb upstream 10.0kb upstream 11941 true scaffold_8: 5654545-5666485 Capsella rubella
Carub.0008s0864 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5656486-5666485 Capsella rubella
Carub.0008s0864 10.0kb downstream 10.0kb downstream 11941 true scaffold_8: 5644545-5656485 Capsella rubella
Carub.0008s0864 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5644545-5654544 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365764 5261 Brassicaceae View MSA
123827653 5264 Brassicales-Malvales View MSA
124343678 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain