Gene : Carub.0008s0427 C. rubella v1.1
Defline:  (1 of 1) PF00326//PF05705 - Prolyl oligopeptidase family (Peptidase_S9) // Eukaryotic protein of unknown function (DUF829) (DUF829) Genomic Order:  427
Name:  ? Carub.0008s0427 Secondary Identifier:  ? PAC:39252488
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0427 0.5kb upstream 0.5kb upstream 3010 true scaffold_8: 1787359-1790368 Capsella rubella
Carub.0008s0427 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1787359-1787858 Capsella rubella
Carub.0008s0427 0.5kb downstream 0.5kb downstream 3010 true scaffold_8: 1787859-1790868 Capsella rubella
Carub.0008s0427 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1790369-1790868 Capsella rubella
Carub.0008s0427 1.0kb upstream 1.0kb upstream 3510 true scaffold_8: 1786859-1790368 Capsella rubella
Carub.0008s0427 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1786859-1787858 Capsella rubella
Carub.0008s0427 1.0kb downstream 1.0kb downstream 3510 true scaffold_8: 1787859-1791368 Capsella rubella
Carub.0008s0427 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1790369-1791368 Capsella rubella
Carub.0008s0427 2.0kb upstream 2.0kb upstream 4510 true scaffold_8: 1785859-1790368 Capsella rubella
Carub.0008s0427 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1785859-1787858 Capsella rubella
Carub.0008s0427 2.0kb downstream 2.0kb downstream 4510 true scaffold_8: 1787859-1792368 Capsella rubella
Carub.0008s0427 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1790369-1792368 Capsella rubella
Carub.0008s0427 5.0kb upstream 5.0kb upstream 7510 true scaffold_8: 1782859-1790368 Capsella rubella
Carub.0008s0427 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1782859-1787858 Capsella rubella
Carub.0008s0427 5.0kb downstream 5.0kb downstream 7510 true scaffold_8: 1787859-1795368 Capsella rubella
Carub.0008s0427 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1790369-1795368 Capsella rubella
Carub.0008s0427 10.0kb upstream 10.0kb upstream 12510 true scaffold_8: 1777859-1790368 Capsella rubella
Carub.0008s0427 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1777859-1787858 Capsella rubella
Carub.0008s0427 10.0kb downstream 10.0kb downstream 12510 true scaffold_8: 1787859-1800368 Capsella rubella
Carub.0008s0427 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1790369-1800368 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374335 5261 Brassicaceae View MSA
123832288 5264 Brassicales-Malvales View MSA
124321791 5266 SBM View MSA
124243343 5268 Malvidae View MSA
124062303 5270 Rosid View MSA
123747680 5271 Pentapetalae View MSA
122786180 5272 Eudicot View MSA
122043502 5273 Angiosperm View MSA
121347212 5274 Embryophyte View MSA
123380510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain