Gene : Carub.0008s0647 C. rubella v1.1
Defline:  (1 of 2) 2.8.1.4//2.8.1.7 - tRNA sulfurtransferase // Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  647
Name:  ? Carub.0008s0647 Secondary Identifier:  ? PAC:39250487
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY0-1021 Capsella rubella pathologic  
Crubella PWY-6823 Capsella rubella pathologic  
Crubella PWY-7250 Capsella rubella pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0647 0.5kb upstream 0.5kb upstream 4052 true scaffold_8: 3067185-3071236 Capsella rubella
Carub.0008s0647 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3067185-3067684 Capsella rubella
Carub.0008s0647 0.5kb downstream 0.5kb downstream 4052 true scaffold_8: 3067685-3071736 Capsella rubella
Carub.0008s0647 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3071237-3071736 Capsella rubella
Carub.0008s0647 1.0kb upstream 1.0kb upstream 4552 true scaffold_8: 3066685-3071236 Capsella rubella
Carub.0008s0647 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3066685-3067684 Capsella rubella
Carub.0008s0647 1.0kb downstream 1.0kb downstream 4552 true scaffold_8: 3067685-3072236 Capsella rubella
Carub.0008s0647 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3071237-3072236 Capsella rubella
Carub.0008s0647 2.0kb upstream 2.0kb upstream 5552 true scaffold_8: 3065685-3071236 Capsella rubella
Carub.0008s0647 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3065685-3067684 Capsella rubella
Carub.0008s0647 2.0kb downstream 2.0kb downstream 5552 true scaffold_8: 3067685-3073236 Capsella rubella
Carub.0008s0647 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3071237-3073236 Capsella rubella
Carub.0008s0647 5.0kb upstream 5.0kb upstream 8552 true scaffold_8: 3062685-3071236 Capsella rubella
Carub.0008s0647 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3062685-3067684 Capsella rubella
Carub.0008s0647 5.0kb downstream 5.0kb downstream 8552 true scaffold_8: 3067685-3076236 Capsella rubella
Carub.0008s0647 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3071237-3076236 Capsella rubella
Carub.0008s0647 10.0kb upstream 10.0kb upstream 13552 true scaffold_8: 3057685-3071236 Capsella rubella
Carub.0008s0647 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3057685-3067684 Capsella rubella
Carub.0008s0647 10.0kb downstream 10.0kb downstream 13552 true scaffold_8: 3067685-3081236 Capsella rubella
Carub.0008s0647 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3071237-3081236 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381679 5261 Brassicaceae View MSA
123841025 5264 Brassicales-Malvales View MSA
124345710 5266 SBM View MSA
124242498 5268 Malvidae View MSA
124061540 5270 Rosid View MSA
123736557 5271 Pentapetalae View MSA
122792411 5272 Eudicot View MSA
122044530 5273 Angiosperm View MSA
121345192 5274 Embryophyte View MSA
123427133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain