Gene : Carub.0008s0648 C. rubella v1.1
Defline:  (1 of 3) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) Genomic Order:  648
Name:  ? Carub.0008s0648 Secondary Identifier:  ? PAC:39252458
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0648 0.5kb upstream 0.5kb upstream 7689 true scaffold_8: 3072040-3079728 Capsella rubella
Carub.0008s0648 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3079229-3079728 Capsella rubella
Carub.0008s0648 0.5kb downstream 0.5kb downstream 7689 true scaffold_8: 3071540-3079228 Capsella rubella
Carub.0008s0648 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3071540-3072039 Capsella rubella
Carub.0008s0648 1.0kb upstream 1.0kb upstream 8189 true scaffold_8: 3072040-3080228 Capsella rubella
Carub.0008s0648 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3079229-3080228 Capsella rubella
Carub.0008s0648 1.0kb downstream 1.0kb downstream 8189 true scaffold_8: 3071040-3079228 Capsella rubella
Carub.0008s0648 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3071040-3072039 Capsella rubella
Carub.0008s0648 2.0kb upstream 2.0kb upstream 9189 true scaffold_8: 3072040-3081228 Capsella rubella
Carub.0008s0648 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3079229-3081228 Capsella rubella
Carub.0008s0648 2.0kb downstream 2.0kb downstream 9189 true scaffold_8: 3070040-3079228 Capsella rubella
Carub.0008s0648 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3070040-3072039 Capsella rubella
Carub.0008s0648 5.0kb upstream 5.0kb upstream 12189 true scaffold_8: 3072040-3084228 Capsella rubella
Carub.0008s0648 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3079229-3084228 Capsella rubella
Carub.0008s0648 5.0kb downstream 5.0kb downstream 12189 true scaffold_8: 3067040-3079228 Capsella rubella
Carub.0008s0648 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3067040-3072039 Capsella rubella
Carub.0008s0648 10.0kb upstream 10.0kb upstream 17189 true scaffold_8: 3072040-3089228 Capsella rubella
Carub.0008s0648 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3079229-3089228 Capsella rubella
Carub.0008s0648 10.0kb downstream 10.0kb downstream 17189 true scaffold_8: 3062040-3079228 Capsella rubella
Carub.0008s0648 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3062040-3072039 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026403 5273 Angiosperm View MSA
122363315 5261 Brassicaceae View MSA
123839945 5264 Brassicales-Malvales View MSA
124339631 5266 SBM View MSA
124247818 5268 Malvidae View MSA
124066178 5270 Rosid View MSA
123742031 5271 Pentapetalae View MSA
122789000 5272 Eudicot View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain