Gene : Carub.0008s0658 C. rubella v1.1

Defline:  (1 of 1) K12173 - BRCA1-A complex subunit BRE (BRE, BRCC45) Genomic Order:  658
Name:  ? Carub.0008s0658 Secondary Identifier:  ? PAC:39251263

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0658 0.5kb upstream 0.5kb upstream 3031 true scaffold_8: 3227373-3230403 Capsella rubella
Carub.0008s0658 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3229904-3230403 Capsella rubella
Carub.0008s0658 0.5kb downstream 0.5kb downstream 3031 true scaffold_8: 3226873-3229903 Capsella rubella
Carub.0008s0658 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3226873-3227372 Capsella rubella
Carub.0008s0658 1.0kb upstream 1.0kb upstream 3531 true scaffold_8: 3227373-3230903 Capsella rubella
Carub.0008s0658 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3229904-3230903 Capsella rubella
Carub.0008s0658 1.0kb downstream 1.0kb downstream 3531 true scaffold_8: 3226373-3229903 Capsella rubella
Carub.0008s0658 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3226373-3227372 Capsella rubella
Carub.0008s0658 2.0kb upstream 2.0kb upstream 4531 true scaffold_8: 3227373-3231903 Capsella rubella
Carub.0008s0658 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3229904-3231903 Capsella rubella
Carub.0008s0658 2.0kb downstream 2.0kb downstream 4531 true scaffold_8: 3225373-3229903 Capsella rubella
Carub.0008s0658 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3225373-3227372 Capsella rubella
Carub.0008s0658 5.0kb upstream 5.0kb upstream 7531 true scaffold_8: 3227373-3234903 Capsella rubella
Carub.0008s0658 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3229904-3234903 Capsella rubella
Carub.0008s0658 5.0kb downstream 5.0kb downstream 7531 true scaffold_8: 3222373-3229903 Capsella rubella
Carub.0008s0658 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3222373-3227372 Capsella rubella
Carub.0008s0658 10.0kb upstream 10.0kb upstream 12531 true scaffold_8: 3227373-3239903 Capsella rubella
Carub.0008s0658 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3229904-3239903 Capsella rubella
Carub.0008s0658 10.0kb downstream 10.0kb downstream 12531 true scaffold_8: 3217373-3229903 Capsella rubella
Carub.0008s0658 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3217373-3227372 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370535 5261 Brassicaceae View MSA
123829345 5264 Brassicales-Malvales View MSA
124341507 5266 SBM View MSA
124244934 5268 Malvidae View MSA
124062170 5270 Rosid View MSA
123740912 5271 Pentapetalae View MSA
122788838 5272 Eudicot View MSA
122044456 5273 Angiosperm View MSA
121345722 5274 Embryophyte View MSA
123380259 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain