Gene : Carub.0008s0305 C. rubella v1.1

Defline:  (1 of 1) K03021 - DNA-directed RNA polymerase III subunit RPC2 (RPC2, POLR3B) Genomic Order:  305
Name:  ? Carub.0008s0305 Secondary Identifier:  ? PAC:39251673

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0305 0.5kb upstream 0.5kb upstream 11216 true scaffold_8: 1231655-1242870 Capsella rubella
Carub.0008s0305 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1231655-1232154 Capsella rubella
Carub.0008s0305 0.5kb downstream 0.5kb downstream 11216 true scaffold_8: 1232155-1243370 Capsella rubella
Carub.0008s0305 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1242871-1243370 Capsella rubella
Carub.0008s0305 1.0kb upstream 1.0kb upstream 11716 true scaffold_8: 1231155-1242870 Capsella rubella
Carub.0008s0305 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1231155-1232154 Capsella rubella
Carub.0008s0305 1.0kb downstream 1.0kb downstream 11716 true scaffold_8: 1232155-1243870 Capsella rubella
Carub.0008s0305 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1242871-1243870 Capsella rubella
Carub.0008s0305 2.0kb upstream 2.0kb upstream 12716 true scaffold_8: 1230155-1242870 Capsella rubella
Carub.0008s0305 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1230155-1232154 Capsella rubella
Carub.0008s0305 2.0kb downstream 2.0kb downstream 12716 true scaffold_8: 1232155-1244870 Capsella rubella
Carub.0008s0305 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1242871-1244870 Capsella rubella
Carub.0008s0305 5.0kb upstream 5.0kb upstream 15716 true scaffold_8: 1227155-1242870 Capsella rubella
Carub.0008s0305 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1227155-1232154 Capsella rubella
Carub.0008s0305 5.0kb downstream 5.0kb downstream 15716 true scaffold_8: 1232155-1247870 Capsella rubella
Carub.0008s0305 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1242871-1247870 Capsella rubella
Carub.0008s0305 10.0kb upstream 10.0kb upstream 20716 true scaffold_8: 1222155-1242870 Capsella rubella
Carub.0008s0305 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1222155-1232154 Capsella rubella
Carub.0008s0305 10.0kb downstream 10.0kb downstream 20716 true scaffold_8: 1232155-1252870 Capsella rubella
Carub.0008s0305 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1242871-1252870 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376888 5261 Brassicaceae View MSA
123830223 5264 Brassicales-Malvales View MSA
124346227 5266 SBM View MSA
124238412 5268 Malvidae View MSA
124050748 5270 Rosid View MSA
123752243 5271 Pentapetalae View MSA
122792415 5272 Eudicot View MSA
122051648 5273 Angiosperm View MSA
121349897 5274 Embryophyte View MSA
123426325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain