Protein Family : nuclear RNA polymerase C2 122051648

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  140
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140 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29686.t000004 (1 of 1) K03021 - DNA-directed RNA polymerase III subunit RPC2 (RPC2, POLR3B) R. communis v0.1 17338   29686: 58642-75979
Cucsa.361180 (1 of 1) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 C. sativus v1.0 38871   scaffold03588: 1581726-1620596
orange1.1g001092m.g (1 of 1) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 C. sinensis v1.1 22593   scaffold00333: 92059-114651
AT5G45140 (1 of 1) K03021 - DNA-directed RNA polymerase III subunit RPC2 (RPC2, POLR3B) A. thaliana TAIR10 NRPC2 10911   Chr5: 18247228-18258138
ATCG00190 (1 of 1) K03043 - DNA-directed RNA polymerase subunit beta (rpoB) A. thaliana TAIR10 3219   ChrC: 23111-26329
Thhalv10000748m.g (1 of 1) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 E. salsugineum v1.0 10416   scaffold_20: 847095-857510
Ciclev10000078m.g (1 of 1) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 C. clementina v1.0 21028   scaffold_5: 20865263-20886290
Lus10017504.g (1 of 5) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 L. usitatissimum v1.0 11992   scaffold1253: 284020-296011
Lus10028778.g (1 of 1) PF00562//PF03966//PF04560//PF04561//PF04563//PF04565//PF04566//PF04567 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // Trm112p-like protein (Trm112p) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) // RNA polymerase beta subunit (RNA_pol_Rpb2_1) // RNA polymerase Rpb2, domain 3 (RNA_pol_Rpb2_3) // RNA polymerase Rpb2, domain 4 (RNA_pol_Rpb2_4) // RNA polymerase Rpb2, domain 5 (RNA_pol_Rpb2_5) L. usitatissimum v1.0 14206   scaffold540: 208776-222981
Lus10011322.g (1 of 1) KOG0215 - RNA polymerase III, second largest subunit L. usitatissimum v1.0 4271   scaffold1037: 408332-412602
Gorai.004G101400 (1 of 1) PF00562//PF04560 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) G. raimondii v2.1 1854   Chr04: 18564809-18566662
Gorai.012G019600 (1 of 4) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 G. raimondii v2.1 23257   Chr12: 2360445-2383701
Gorai.008G086500 (1 of 1) PF00562//PF04560//PF04561//PF04997 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) // RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) G. raimondii v2.1 2968   Chr08: 18965975-18968942
Gorai.005G167700 (1 of 1) PF00562//PF04560//PF04561//PF04565//PF04997 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) // RNA polymerase Rpb2, domain 3 (RNA_pol_Rpb2_3) // RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) G. raimondii v2.1 3031   Chr05: 49286442-49289472
Gorai.007G005200 (1 of 1) PF00562//PF04560//PF04561//PF04563//PF04566//PF04567 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) // RNA polymerase beta subunit (RNA_pol_Rpb2_1) // RNA polymerase Rpb2, domain 4 (RNA_pol_Rpb2_4) // RNA polymerase Rpb2, domain 5 (RNA_pol_Rpb2_5) G. raimondii v2.1 18341   Chr07: 401632-419972
Thecc1EG046379 (1 of 1) K03043 - DNA-directed RNA polymerase subunit beta (rpoB) T. cacao v1.1 4244   cacao1chloroplast: 23138-27381
Thecc1EG044750 (1 of 4) K03021 - DNA-directed RNA polymerase III subunit RPC2 (RPC2, POLR3B) T. cacao v1.1 28190   scaffold_10r: 19193099-19221288
Thecc1EG024705 (1 of 1) PF00562//PF04560//PF04567 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 5 (RNA_pol_Rpb2_5) T. cacao v1.1 13234   scaffold_5: 27961068-27974301
Migut.D01417 (1 of 3) PTHR20856:SF20 - DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA M. guttatus v2.0 3200   scaffold_4: 7931235-7934434
Migut.B01181 (1 of 2) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 M. guttatus v2.0 14503   scaffold_2: 14005108-14019610
Migut.B01180 (1 of 2) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 M. guttatus v2.0 9333   scaffold_2: 13992262-14001594
Araha.5635s0010 (1 of 1) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 A. halleri v1.1 11087   Scaffold5635: 51720-62806
Cagra.0779s0008 (1 of 1) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 C. grandiflora v1.1 10734   Scaffold779: 35490-46223
Glyma.07G125300 (1 of 3) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 G. max Wm82.a2.v1 59091   Chr07: 14920233-14979323
Glyma.15G073800 (1 of 1) PF00562//PF04560//PF04561//PF04565//PF04566//PF04567 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) // RNA polymerase Rpb2, domain 3 (RNA_pol_Rpb2_3) // RNA polymerase Rpb2, domain 4 (RNA_pol_Rpb2_4) // RNA polymerase Rpb2, domain 5 (RNA_pol_Rpb2_5) G. max Wm82.a2.v1 7886   Chr15: 5643059-5650944
Glyma.01G006500 (1 of 3) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 G. max Wm82.a2.v1 27803   Chr01: 614283-642085
Brara.F03700 (1 of 2) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 B. rapa FPsc v1.3 9600   A06: 28142448-28152047
Brara.B02816 (1 of 2) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 B. rapa FPsc v1.3 3636   A02: 22082391-22086026
Bostr.25038s0001 (1 of 1) PTHR20856:SF8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 B. stricta v1.2 6163   Scaffold25038: 1-6163
Medtr0189s0050 (1 of 2) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED M. truncatula Mt4.0v1 3123   scaffold0189: 29521-32643

140 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.361180.1 C. sativus v1.0 122051648 nuclear RNA polymerase C2 1 5273 Angiosperm
Ciclev10000078m C. clementina v1.0 122051648 nuclear RNA polymerase C2 1 5273 Angiosperm
Lus10011322 L. usitatissimum v1.0 122051648 nuclear RNA polymerase C2 3 5273 Angiosperm
Gorai.012G019600.1 G. raimondii v2.1 122051648 nuclear RNA polymerase C2 5 5273 Angiosperm
Migut.D01417.1.p M. guttatus v2.0 122051648 nuclear RNA polymerase C2 3 5273 Angiosperm
Migut.B01180.1.p M. guttatus v2.0 122051648 nuclear RNA polymerase C2 3 5273 Angiosperm
Glyma.07G125300.1.p G. max Wm82.a2.v1 122051648 nuclear RNA polymerase C2 3 5273 Angiosperm
Glyma.01G006500.1.p G. max Wm82.a2.v1 122051648 nuclear RNA polymerase C2 3 5273 Angiosperm
SapurV1A.0720s0050.1.p S. purpurea v1.0 122051648 nuclear RNA polymerase C2 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00145.34 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00102.61 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00020.115 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00020.118 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00186.12 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold01499.1 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00626.1 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00068.138 A. trichopoda v1.0 122051648 nuclear RNA polymerase C2 8 5273 Angiosperm
Traes_7AL_81FEA962B.1 T. aestivum v2.2 122051648 nuclear RNA polymerase C2 6 5273 Angiosperm
Traes_6BL_56694A8D4.1 T. aestivum v2.2 122051648 nuclear RNA polymerase C2 6 5273 Angiosperm
Traes_7BS_270A5A21B.1 T. aestivum v2.2 122051648 nuclear RNA polymerase C2 6 5273 Angiosperm
Traes_1BL_ED21C1C37.1 T. aestivum v2.2 122051648 nuclear RNA polymerase C2 6 5273 Angiosperm
Traes_2AS_C411984C9.1 T. aestivum v2.2 122051648 nuclear RNA polymerase C2 6 5273 Angiosperm
Traes_6DL_3B3DF1B1D.1 T. aestivum v2.2 122051648 nuclear RNA polymerase C2 6 5273 Angiosperm
Eucgr.A00794.1.p E. grandis v2.0 122051648 nuclear RNA polymerase C2 1 5273 Angiosperm
GSMUA_AchrUn_randomP02940_001 M. acuminata v1 122051648 nuclear RNA polymerase C2 1 5273 Angiosperm
Manes.04G041100.1.p M. esculenta v6.1 122051648 nuclear RNA polymerase C2 2 5273 Angiosperm
Manes.04G155900.1.p M. esculenta v6.1 122051648 nuclear RNA polymerase C2 2 5273 Angiosperm
Kalax.0063s0047.1.p K. laxiflora v1.1 122051648 nuclear RNA polymerase C2 3 5273 Angiosperm
Kalax.0402s0044.1.p K. laxiflora v1.1 122051648 nuclear RNA polymerase C2 3 5273 Angiosperm
Seita.9G206600.1.p S. italica v2.2 122051648 nuclear RNA polymerase C2 2 5273 Angiosperm