Gene : Gorai.008G086500 G. raimondii v2.1
Defline:  (1 of 1) PF00562//PF04560//PF04561//PF04997 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) // RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) Genomic Order:  865
Name:  ? Gorai.008G086500 Secondary Identifier:  ? PAC:26817068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G086500 0.5kb upstream 0.5kb upstream 3468 true Chr08: 18965975-18969442 Gossypium raimondii
Gorai.008G086500 0.5kb upstream 0.5kb upstream 500 false Chr08: 18968943-18969442 Gossypium raimondii
Gorai.008G086500 0.5kb downstream 0.5kb downstream 3468 true Chr08: 18965475-18968942 Gossypium raimondii
Gorai.008G086500 0.5kb downstream 0.5kb downstream 500 false Chr08: 18965475-18965974 Gossypium raimondii
Gorai.008G086500 1.0kb upstream 1.0kb upstream 3968 true Chr08: 18965975-18969942 Gossypium raimondii
Gorai.008G086500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18968943-18969942 Gossypium raimondii
Gorai.008G086500 1.0kb downstream 1.0kb downstream 3968 true Chr08: 18964975-18968942 Gossypium raimondii
Gorai.008G086500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18964975-18965974 Gossypium raimondii
Gorai.008G086500 2.0kb upstream 2.0kb upstream 4968 true Chr08: 18965975-18970942 Gossypium raimondii
Gorai.008G086500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18968943-18970942 Gossypium raimondii
Gorai.008G086500 2.0kb downstream 2.0kb downstream 4968 true Chr08: 18963975-18968942 Gossypium raimondii
Gorai.008G086500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18963975-18965974 Gossypium raimondii
Gorai.008G086500 5.0kb upstream 5.0kb upstream 7968 true Chr08: 18965975-18973942 Gossypium raimondii
Gorai.008G086500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18968943-18973942 Gossypium raimondii
Gorai.008G086500 5.0kb downstream 5.0kb downstream 7968 true Chr08: 18960975-18968942 Gossypium raimondii
Gorai.008G086500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18960975-18965974 Gossypium raimondii
Gorai.008G086500 10.0kb upstream 10.0kb upstream 12968 true Chr08: 18965975-18978942 Gossypium raimondii
Gorai.008G086500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18968943-18978942 Gossypium raimondii
Gorai.008G086500 10.0kb downstream 10.0kb downstream 12968 true Chr08: 18955975-18968942 Gossypium raimondii
Gorai.008G086500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18955975-18965974 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123810021 5264 Brassicales-Malvales Singleton cluster - no MSA
124306748 5266 SBM Singleton cluster - no MSA
124156854 5268 Malvidae Singleton cluster - no MSA
123881459 5270 Rosid Singleton cluster - no MSA
123751051 5271 Pentapetalae View MSA
122795638 5272 Eudicot View MSA
122051648 5273 Angiosperm View MSA
121349897 5274 Embryophyte View MSA
123426325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain