Gene : Carub.0006s0884 C. rubella v1.1
Defline:  (1 of 1) PTHR18934//PTHR18934:SF140 - ATP-DEPENDENT RNA HELICASE // HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  884
Name:  ? Carub.0006s0884 Secondary Identifier:  ? PAC:39249889
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0884 0.5kb upstream 0.5kb upstream 6867 true scaffold_6: 3198699-3205565 Capsella rubella
Carub.0006s0884 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3198699-3199198 Capsella rubella
Carub.0006s0884 0.5kb downstream 0.5kb downstream 6867 true scaffold_6: 3199199-3206065 Capsella rubella
Carub.0006s0884 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3205566-3206065 Capsella rubella
Carub.0006s0884 1.0kb upstream 1.0kb upstream 7367 true scaffold_6: 3198199-3205565 Capsella rubella
Carub.0006s0884 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3198199-3199198 Capsella rubella
Carub.0006s0884 1.0kb downstream 1.0kb downstream 7367 true scaffold_6: 3199199-3206565 Capsella rubella
Carub.0006s0884 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3205566-3206565 Capsella rubella
Carub.0006s0884 2.0kb upstream 2.0kb upstream 8367 true scaffold_6: 3197199-3205565 Capsella rubella
Carub.0006s0884 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3197199-3199198 Capsella rubella
Carub.0006s0884 2.0kb downstream 2.0kb downstream 8367 true scaffold_6: 3199199-3207565 Capsella rubella
Carub.0006s0884 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3205566-3207565 Capsella rubella
Carub.0006s0884 5.0kb upstream 5.0kb upstream 11367 true scaffold_6: 3194199-3205565 Capsella rubella
Carub.0006s0884 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3194199-3199198 Capsella rubella
Carub.0006s0884 5.0kb downstream 5.0kb downstream 11367 true scaffold_6: 3199199-3210565 Capsella rubella
Carub.0006s0884 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3205566-3210565 Capsella rubella
Carub.0006s0884 10.0kb upstream 10.0kb upstream 16367 true scaffold_6: 3189199-3205565 Capsella rubella
Carub.0006s0884 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3189199-3199198 Capsella rubella
Carub.0006s0884 10.0kb downstream 10.0kb downstream 16367 true scaffold_6: 3199199-3215565 Capsella rubella
Carub.0006s0884 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3205566-3215565 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372212 5261 Brassicaceae View MSA
123830343 5264 Brassicales-Malvales View MSA
124339846 5266 SBM View MSA
124241686 5268 Malvidae View MSA
124065250 5270 Rosid View MSA
123737649 5271 Pentapetalae View MSA
122792677 5272 Eudicot View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain