Gene : Carub.0008s0199 C. rubella v1.1
Defline:  (1 of 1) 3.6.1.3//6.6.1.1 - Adenosinetriphosphatase / Triphosphatase // Magnesium chelatase / Protoporphyrin IX Mg-chelatase Genomic Order:  199
Name:  ? Carub.0008s0199 Secondary Identifier:  ? PAC:39250289
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CHLOROPHYLL-SYN Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0199 0.5kb upstream 0.5kb upstream 2154 true scaffold_8: 783217-785370 Capsella rubella
Carub.0008s0199 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 784871-785370 Capsella rubella
Carub.0008s0199 0.5kb downstream 0.5kb downstream 2154 true scaffold_8: 782717-784870 Capsella rubella
Carub.0008s0199 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 782717-783216 Capsella rubella
Carub.0008s0199 1.0kb upstream 1.0kb upstream 2654 true scaffold_8: 783217-785870 Capsella rubella
Carub.0008s0199 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 784871-785870 Capsella rubella
Carub.0008s0199 1.0kb downstream 1.0kb downstream 2654 true scaffold_8: 782217-784870 Capsella rubella
Carub.0008s0199 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 782217-783216 Capsella rubella
Carub.0008s0199 2.0kb upstream 2.0kb upstream 3654 true scaffold_8: 783217-786870 Capsella rubella
Carub.0008s0199 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 784871-786870 Capsella rubella
Carub.0008s0199 2.0kb downstream 2.0kb downstream 3654 true scaffold_8: 781217-784870 Capsella rubella
Carub.0008s0199 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 781217-783216 Capsella rubella
Carub.0008s0199 5.0kb upstream 5.0kb upstream 6654 true scaffold_8: 783217-789870 Capsella rubella
Carub.0008s0199 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 784871-789870 Capsella rubella
Carub.0008s0199 5.0kb downstream 5.0kb downstream 6654 true scaffold_8: 778217-784870 Capsella rubella
Carub.0008s0199 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 778217-783216 Capsella rubella
Carub.0008s0199 10.0kb upstream 10.0kb upstream 11654 true scaffold_8: 783217-794870 Capsella rubella
Carub.0008s0199 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 784871-794870 Capsella rubella
Carub.0008s0199 10.0kb downstream 10.0kb downstream 11654 true scaffold_8: 773217-784870 Capsella rubella
Carub.0008s0199 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 773217-783216 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122363978 5261 Brassicaceae View MSA
123838175 5264 Brassicales-Malvales View MSA
124343435 5266 SBM View MSA
124251602 5268 Malvidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain