Gene : Carub.0008s0461 C. rubella v1.1
Defline:  (1 of 1) 1.1.1.1//1.1.1.284//1.2.1.1 - Alcohol dehydrogenase / Aldehyde reductase // S-(hydroxymethyl)glutathione dehydrogenase / NAD-linked formaldehyde dehydrogenase // Transferred entry: 1.1.1.284 and 4.4.1.22 Genomic Order:  461
Name:  ? Carub.0008s0461 Secondary Identifier:  ? PAC:39252397
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1801 Capsella rubella pathologic  
Crubella PWY-5486 Capsella rubella pathologic  
Crubella PWY-5751 Capsella rubella pathologic  
Crubella PWY-6333 Capsella rubella pathologic  
Crubella PWY66-21 Capsella rubella pathologic  
Crubella PWY66-389 Capsella rubella pathologic  
Crubella PWY-6802 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0461 0.5kb upstream 0.5kb upstream 2771 true scaffold_8: 1964325-1967095 Capsella rubella
Carub.0008s0461 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1966596-1967095 Capsella rubella
Carub.0008s0461 0.5kb downstream 0.5kb downstream 2771 true scaffold_8: 1963825-1966595 Capsella rubella
Carub.0008s0461 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1963825-1964324 Capsella rubella
Carub.0008s0461 1.0kb upstream 1.0kb upstream 3271 true scaffold_8: 1964325-1967595 Capsella rubella
Carub.0008s0461 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1966596-1967595 Capsella rubella
Carub.0008s0461 1.0kb downstream 1.0kb downstream 3271 true scaffold_8: 1963325-1966595 Capsella rubella
Carub.0008s0461 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1963325-1964324 Capsella rubella
Carub.0008s0461 2.0kb upstream 2.0kb upstream 4271 true scaffold_8: 1964325-1968595 Capsella rubella
Carub.0008s0461 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1966596-1968595 Capsella rubella
Carub.0008s0461 2.0kb downstream 2.0kb downstream 4271 true scaffold_8: 1962325-1966595 Capsella rubella
Carub.0008s0461 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1962325-1964324 Capsella rubella
Carub.0008s0461 5.0kb upstream 5.0kb upstream 7271 true scaffold_8: 1964325-1971595 Capsella rubella
Carub.0008s0461 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1966596-1971595 Capsella rubella
Carub.0008s0461 5.0kb downstream 5.0kb downstream 7271 true scaffold_8: 1959325-1966595 Capsella rubella
Carub.0008s0461 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1959325-1964324 Capsella rubella
Carub.0008s0461 10.0kb upstream 10.0kb upstream 12271 true scaffold_8: 1964325-1976595 Capsella rubella
Carub.0008s0461 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1966596-1976595 Capsella rubella
Carub.0008s0461 10.0kb downstream 10.0kb downstream 12271 true scaffold_8: 1954325-1966595 Capsella rubella
Carub.0008s0461 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1954325-1964324 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367475 5261 Brassicaceae View MSA
123831887 5264 Brassicales-Malvales View MSA
124337937 5266 SBM View MSA
124251337 5268 Malvidae View MSA
124074048 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain