Gene : Carub.0008s0072 C. rubella v1.1

Defline:  (1 of 1) K06640 - serine/threonine-protein kinase ATR (ATR) Genomic Order:  72
Name:  ? Carub.0008s0072 Secondary Identifier:  ? PAC:39251589

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0072 0.5kb upstream 0.5kb upstream 10940 true scaffold_8: 249141-260080 Capsella rubella
Carub.0008s0072 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 259581-260080 Capsella rubella
Carub.0008s0072 0.5kb downstream 0.5kb downstream 10940 true scaffold_8: 248641-259580 Capsella rubella
Carub.0008s0072 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 248641-249140 Capsella rubella
Carub.0008s0072 1.0kb upstream 1.0kb upstream 11440 true scaffold_8: 249141-260580 Capsella rubella
Carub.0008s0072 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 259581-260580 Capsella rubella
Carub.0008s0072 1.0kb downstream 1.0kb downstream 11440 true scaffold_8: 248141-259580 Capsella rubella
Carub.0008s0072 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 248141-249140 Capsella rubella
Carub.0008s0072 2.0kb upstream 2.0kb upstream 12440 true scaffold_8: 249141-261580 Capsella rubella
Carub.0008s0072 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 259581-261580 Capsella rubella
Carub.0008s0072 2.0kb downstream 2.0kb downstream 12440 true scaffold_8: 247141-259580 Capsella rubella
Carub.0008s0072 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 247141-249140 Capsella rubella
Carub.0008s0072 5.0kb upstream 5.0kb upstream 15440 true scaffold_8: 249141-264580 Capsella rubella
Carub.0008s0072 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 259581-264580 Capsella rubella
Carub.0008s0072 5.0kb downstream 5.0kb downstream 15440 true scaffold_8: 244141-259580 Capsella rubella
Carub.0008s0072 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 244141-249140 Capsella rubella
Carub.0008s0072 10.0kb upstream 10.0kb upstream 20440 true scaffold_8: 249141-269580 Capsella rubella
Carub.0008s0072 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 259581-269580 Capsella rubella
Carub.0008s0072 10.0kb downstream 10.0kb downstream 20440 true scaffold_8: 239141-259580 Capsella rubella
Carub.0008s0072 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 239141-249140 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366633 5261 Brassicaceae View MSA
123829590 5264 Brassicales-Malvales View MSA
124339305 5266 SBM View MSA
124241595 5268 Malvidae View MSA
124068792 5270 Rosid View MSA
123737663 5271 Pentapetalae View MSA
122786169 5272 Eudicot View MSA
122044590 5273 Angiosperm View MSA
121345058 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain