Gene : Carub.0002s0505 C. rubella v1.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF116 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  505
Name:  ? Carub.0002s0505 Secondary Identifier:  ? PAC:39245424
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0505 0.5kb upstream 0.5kb upstream 2570 true scaffold_2: 2077812-2080381 Capsella rubella
Carub.0002s0505 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2079882-2080381 Capsella rubella
Carub.0002s0505 0.5kb downstream 0.5kb downstream 2570 true scaffold_2: 2077312-2079881 Capsella rubella
Carub.0002s0505 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2077312-2077811 Capsella rubella
Carub.0002s0505 1.0kb upstream 1.0kb upstream 3070 true scaffold_2: 2077812-2080881 Capsella rubella
Carub.0002s0505 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2079882-2080881 Capsella rubella
Carub.0002s0505 1.0kb downstream 1.0kb downstream 3070 true scaffold_2: 2076812-2079881 Capsella rubella
Carub.0002s0505 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2076812-2077811 Capsella rubella
Carub.0002s0505 2.0kb upstream 2.0kb upstream 4070 true scaffold_2: 2077812-2081881 Capsella rubella
Carub.0002s0505 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2079882-2081881 Capsella rubella
Carub.0002s0505 2.0kb downstream 2.0kb downstream 4070 true scaffold_2: 2075812-2079881 Capsella rubella
Carub.0002s0505 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2075812-2077811 Capsella rubella
Carub.0002s0505 5.0kb upstream 5.0kb upstream 7070 true scaffold_2: 2077812-2084881 Capsella rubella
Carub.0002s0505 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2079882-2084881 Capsella rubella
Carub.0002s0505 5.0kb downstream 5.0kb downstream 7070 true scaffold_2: 2072812-2079881 Capsella rubella
Carub.0002s0505 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2072812-2077811 Capsella rubella
Carub.0002s0505 10.0kb upstream 10.0kb upstream 12070 true scaffold_2: 2077812-2089881 Capsella rubella
Carub.0002s0505 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2079882-2089881 Capsella rubella
Carub.0002s0505 10.0kb downstream 10.0kb downstream 12070 true scaffold_2: 2067812-2079881 Capsella rubella
Carub.0002s0505 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2067812-2077811 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367621 5261 Brassicaceae View MSA
123836521 5264 Brassicales-Malvales View MSA
124341451 5266 SBM View MSA
124245770 5268 Malvidae View MSA
124069612 5270 Rosid View MSA
123741587 5271 Pentapetalae View MSA
122786622 5272 Eudicot View MSA
122046188 5273 Angiosperm View MSA
121310571 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain