Gene : Carub.0002s0502 C. rubella v1.1
Defline:  (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  502
Name:  ? Carub.0002s0502 Secondary Identifier:  ? PAC:39244084
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0502 0.5kb upstream 0.5kb upstream 2892 true scaffold_2: 2057532-2060423 Capsella rubella
Carub.0002s0502 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2057532-2058031 Capsella rubella
Carub.0002s0502 0.5kb downstream 0.5kb downstream 2892 true scaffold_2: 2058032-2060923 Capsella rubella
Carub.0002s0502 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2060424-2060923 Capsella rubella
Carub.0002s0502 1.0kb upstream 1.0kb upstream 3392 true scaffold_2: 2057032-2060423 Capsella rubella
Carub.0002s0502 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2057032-2058031 Capsella rubella
Carub.0002s0502 1.0kb downstream 1.0kb downstream 3392 true scaffold_2: 2058032-2061423 Capsella rubella
Carub.0002s0502 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2060424-2061423 Capsella rubella
Carub.0002s0502 2.0kb upstream 2.0kb upstream 4392 true scaffold_2: 2056032-2060423 Capsella rubella
Carub.0002s0502 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2056032-2058031 Capsella rubella
Carub.0002s0502 2.0kb downstream 2.0kb downstream 4392 true scaffold_2: 2058032-2062423 Capsella rubella
Carub.0002s0502 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2060424-2062423 Capsella rubella
Carub.0002s0502 5.0kb upstream 5.0kb upstream 7392 true scaffold_2: 2053032-2060423 Capsella rubella
Carub.0002s0502 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2053032-2058031 Capsella rubella
Carub.0002s0502 5.0kb downstream 5.0kb downstream 7392 true scaffold_2: 2058032-2065423 Capsella rubella
Carub.0002s0502 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2060424-2065423 Capsella rubella
Carub.0002s0502 10.0kb upstream 10.0kb upstream 12392 true scaffold_2: 2048032-2060423 Capsella rubella
Carub.0002s0502 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2048032-2058031 Capsella rubella
Carub.0002s0502 10.0kb downstream 10.0kb downstream 12392 true scaffold_2: 2058032-2070423 Capsella rubella
Carub.0002s0502 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2060424-2070423 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368512 5261 Brassicaceae View MSA
123834635 5264 Brassicales-Malvales View MSA
124340315 5266 SBM View MSA
124241965 5268 Malvidae View MSA
124065414 5270 Rosid View MSA
123740690 5271 Pentapetalae View MSA
122787851 5272 Eudicot View MSA
122043195 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346291 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain