Protein Family : radical SAM enzyme, putative, expressed 123429187

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  219

219 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
122498 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE S. moellendorffii v1.0 1536   scaffold_68: 287048-288583
85220 (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN S. moellendorffii v1.0 1745   scaffold_7: 473714-475458
27383.t000003 (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN R. communis v0.1 3657   27383: 16621-20277
28152.t000052 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED R. communis v0.1 3918   28152: 275889-279806
Cucsa.191670 (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE C. sativus v1.0 10186   scaffold01330: 49650-59835
Cucsa.219140 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE C. sativus v1.0 4335   scaffold01658: 1010878-1015212
orange1.1g017203m.g (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE C. sinensis v1.1 3590   scaffold00084: 359897-363486
orange1.1g011810m.g (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE C. sinensis v1.1 3444   scaffold00003: 1880193-1883636
AT3G19630 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED A. thaliana TAIR10 2357   Chr3: 6818387-6820743
AT1G60230 (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED A. thaliana TAIR10 2341   Chr1: 22212084-22214424
AT2G39670 (1 of 1) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) A. thaliana TAIR10 3089   Chr2: 16534230-16537318
Thhalv10016689m.g (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN E. salsugineum v1.0 3041   scaffold_10: 10345453-10348493
Thhalv10020962m.g (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE E. salsugineum v1.0 2448   scaffold_13: 2405847-2408294
Thhalv10023456m.g (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE E. salsugineum v1.0 2321   scaffold_8: 4382913-4385233
Ciclev10028673m.g (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE C. clementina v1.0 2985   scaffold_8: 2070692-2073676
Ciclev10031999m.g (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN C. clementina v1.0 4180   scaffold_4: 118381-122560
Ciclev10031376m.g (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE C. clementina v1.0 3492   scaffold_4: 22737493-22740984
Lus10020989.g (1 of 2) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE L. usitatissimum v1.0 4931   scaffold3: 783704-788634
Lus10029159.g (1 of 3) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE L. usitatissimum v1.0 2049   scaffold376: 828164-830212
Lus10002698.g (1 of 2) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN L. usitatissimum v1.0 2514   scaffold530: 31435-33948
Lus10013005.g (1 of 3) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE L. usitatissimum v1.0 2201   scaffold751: 109697-111897
Lus10005409.g (1 of 2) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE L. usitatissimum v1.0 2937   scaffold847: 1298-4234
Gorai.008G158700 (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE G. raimondii v2.1 4929   Chr08: 42386858-42391786
Gorai.005G231500 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE G. raimondii v2.1 3318   Chr05: 61391720-61395037
Gorai.009G319500 (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN G. raimondii v2.1 4568   Chr09: 30565262-30569829
Genemark1.8547_g (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE C. subellipsoidea C-169 v2.0 2863   scaffold_23: 737300-740162
Genemark1.1870_g (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN C. subellipsoidea C-169 v2.0 2532   scaffold_3: 2189076-2191607
estExt_Genewise1Plus.C_20043 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE C. subellipsoidea C-169 v2.0 3851   scaffold_2: 173505-177355
e_gw1.1.2034.1 (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE M. pusilla CCMP1545 v3.0 1380   scaffold_1: 362119-363498
e_gw1.6.989.1 (1 of 2) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN M. pusilla CCMP1545 v3.0 1548   scaffold_6: 890389-891936

219 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
85220 S. moellendorffii v1.0 123429187 radical SAM enzyme, putative, expressed 2 5275 Viridiplantae
122498 S. moellendorffii v1.0 123429187 radical SAM enzyme, putative, expressed 2 5275 Viridiplantae
27383.m000158 R. communis v0.1 123429187 radical SAM enzyme, putative, expressed 2 5275 Viridiplantae
orange1.1g017203m C. sinensis v1.1 123429187 radical SAM enzyme, putative, expressed 2 5275 Viridiplantae
AT3G19630.1 A. thaliana TAIR10 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Thhalv10020962m E. salsugineum v1.0 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Thhalv10023456m E. salsugineum v1.0 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Lus10002698 L. usitatissimum v1.0 123429187 radical SAM enzyme, putative, expressed 5 5275 Viridiplantae
Lus10005409 L. usitatissimum v1.0 123429187 radical SAM enzyme, putative, expressed 5 5275 Viridiplantae
Gorai.005G231500.1 G. raimondii v2.1 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
151186 M. pusilla CCMP1545 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
148128 M. pusilla CCMP1545 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
148798 M. pusilla CCMP1545 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
156848 M. pusilla CCMP1545 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
60231 C. subellipsoidea C-169 v2.0 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
61059 C. subellipsoidea C-169 v2.0 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
82264 M. sp RCC299 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
69733 M. sp RCC299 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
60237 M. sp RCC299 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
86756 M. sp RCC299 v3.0 123429187 radical SAM enzyme, putative, expressed 4 5275 Viridiplantae
4583 O. lucimarinus v2.0 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
49687 O. lucimarinus v2.0 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Thecc1EG010314t2 T. cacao v1.1 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Cagra.6943s0023.1.p C. grandiflora v1.1 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Migut.L01411.1.p M. guttatus v2.0 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Bostr.23794s0107.1.p B. stricta v1.2 123429187 radical SAM enzyme, putative, expressed 3 5275 Viridiplantae
Cre05.g238500.t1.1 C. reinhardtii v5.6 123429187 radical SAM enzyme, putative, expressed 5 5275 Viridiplantae
Cre02.g086550.t1.1 C. reinhardtii v5.6 123429187 radical SAM enzyme, putative, expressed 5 5275 Viridiplantae
Cre01.g028450.t1.2 C. reinhardtii v5.6 123429187 radical SAM enzyme, putative, expressed 5 5275 Viridiplantae
Cre01.g043000.t1.1 C. reinhardtii v5.6 123429187 radical SAM enzyme, putative, expressed 5 5275 Viridiplantae