Gene : Gorai.008G158700 G. raimondii v2.1
Defline:  (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE Genomic Order:  1587
Name:  ? Gorai.008G158700 Secondary Identifier:  ? PAC:26815947
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G158700 0.5kb upstream 0.5kb upstream 5429 true Chr08: 42386858-42392286 Gossypium raimondii
Gorai.008G158700 0.5kb upstream 0.5kb upstream 500 false Chr08: 42391787-42392286 Gossypium raimondii
Gorai.008G158700 0.5kb downstream 0.5kb downstream 5429 true Chr08: 42386358-42391786 Gossypium raimondii
Gorai.008G158700 0.5kb downstream 0.5kb downstream 500 false Chr08: 42386358-42386857 Gossypium raimondii
Gorai.008G158700 1.0kb upstream 1.0kb upstream 5929 true Chr08: 42386858-42392786 Gossypium raimondii
Gorai.008G158700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42391787-42392786 Gossypium raimondii
Gorai.008G158700 1.0kb downstream 1.0kb downstream 5929 true Chr08: 42385858-42391786 Gossypium raimondii
Gorai.008G158700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42385858-42386857 Gossypium raimondii
Gorai.008G158700 2.0kb upstream 2.0kb upstream 6929 true Chr08: 42386858-42393786 Gossypium raimondii
Gorai.008G158700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42391787-42393786 Gossypium raimondii
Gorai.008G158700 2.0kb downstream 2.0kb downstream 6929 true Chr08: 42384858-42391786 Gossypium raimondii
Gorai.008G158700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42384858-42386857 Gossypium raimondii
Gorai.008G158700 5.0kb upstream 5.0kb upstream 9929 true Chr08: 42386858-42396786 Gossypium raimondii
Gorai.008G158700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42391787-42396786 Gossypium raimondii
Gorai.008G158700 5.0kb downstream 5.0kb downstream 9929 true Chr08: 42381858-42391786 Gossypium raimondii
Gorai.008G158700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42381858-42386857 Gossypium raimondii
Gorai.008G158700 10.0kb upstream 10.0kb upstream 14929 true Chr08: 42386858-42401786 Gossypium raimondii
Gorai.008G158700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42391787-42401786 Gossypium raimondii
Gorai.008G158700 10.0kb downstream 10.0kb downstream 14929 true Chr08: 42376858-42391786 Gossypium raimondii
Gorai.008G158700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42376858-42386857 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834635 5264 Brassicales-Malvales View MSA
124340315 5266 SBM View MSA
124241965 5268 Malvidae View MSA
124065414 5270 Rosid View MSA
123740690 5271 Pentapetalae View MSA
122787851 5272 Eudicot View MSA
122043195 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346291 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain