Gene : Carub.0002s0521 C. rubella v1.1

Defline:  (1 of 2) PTHR11119//PTHR11119:SF50 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED Genomic Order:  521
Name:  ? Carub.0002s0521 Secondary Identifier:  ? PAC:39243825

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0521 0.5kb upstream 0.5kb upstream 3420 true scaffold_2: 2178309-2181728 Capsella rubella
Carub.0002s0521 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2178309-2178808 Capsella rubella
Carub.0002s0521 0.5kb downstream 0.5kb downstream 3420 true scaffold_2: 2178809-2182228 Capsella rubella
Carub.0002s0521 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2181729-2182228 Capsella rubella
Carub.0002s0521 1.0kb upstream 1.0kb upstream 3920 true scaffold_2: 2177809-2181728 Capsella rubella
Carub.0002s0521 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2177809-2178808 Capsella rubella
Carub.0002s0521 1.0kb downstream 1.0kb downstream 3920 true scaffold_2: 2178809-2182728 Capsella rubella
Carub.0002s0521 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2181729-2182728 Capsella rubella
Carub.0002s0521 2.0kb upstream 2.0kb upstream 4920 true scaffold_2: 2176809-2181728 Capsella rubella
Carub.0002s0521 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2176809-2178808 Capsella rubella
Carub.0002s0521 2.0kb downstream 2.0kb downstream 4920 true scaffold_2: 2178809-2183728 Capsella rubella
Carub.0002s0521 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2181729-2183728 Capsella rubella
Carub.0002s0521 5.0kb upstream 5.0kb upstream 7920 true scaffold_2: 2173809-2181728 Capsella rubella
Carub.0002s0521 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2173809-2178808 Capsella rubella
Carub.0002s0521 5.0kb downstream 5.0kb downstream 7920 true scaffold_2: 2178809-2186728 Capsella rubella
Carub.0002s0521 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2181729-2186728 Capsella rubella
Carub.0002s0521 10.0kb upstream 10.0kb upstream 12920 true scaffold_2: 2168809-2181728 Capsella rubella
Carub.0002s0521 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2168809-2178808 Capsella rubella
Carub.0002s0521 10.0kb downstream 10.0kb downstream 12920 true scaffold_2: 2178809-2191728 Capsella rubella
Carub.0002s0521 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2181729-2191728 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366560 5261 Brassicaceae View MSA
123829203 5264 Brassicales-Malvales View MSA
124338621 5266 SBM View MSA
124241115 5268 Malvidae View MSA
124072472 5270 Rosid View MSA
123738745 5271 Pentapetalae View MSA
122794781 5272 Eudicot View MSA
122049429 5273 Angiosperm View MSA
121311395 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain