Gene : Carub.0002s0422 C. rubella v1.1
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  422
Name:  ? Carub.0002s0422 Secondary Identifier:  ? PAC:39243233
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLYCLEAV-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0422 0.5kb upstream 0.5kb upstream 4009 true scaffold_2: 1789112-1793120 Capsella rubella
Carub.0002s0422 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1789112-1789611 Capsella rubella
Carub.0002s0422 0.5kb downstream 0.5kb downstream 4009 true scaffold_2: 1789612-1793620 Capsella rubella
Carub.0002s0422 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1793121-1793620 Capsella rubella
Carub.0002s0422 1.0kb upstream 1.0kb upstream 4509 true scaffold_2: 1788612-1793120 Capsella rubella
Carub.0002s0422 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1788612-1789611 Capsella rubella
Carub.0002s0422 1.0kb downstream 1.0kb downstream 4509 true scaffold_2: 1789612-1794120 Capsella rubella
Carub.0002s0422 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1793121-1794120 Capsella rubella
Carub.0002s0422 2.0kb upstream 2.0kb upstream 5509 true scaffold_2: 1787612-1793120 Capsella rubella
Carub.0002s0422 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1787612-1789611 Capsella rubella
Carub.0002s0422 2.0kb downstream 2.0kb downstream 5509 true scaffold_2: 1789612-1795120 Capsella rubella
Carub.0002s0422 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1793121-1795120 Capsella rubella
Carub.0002s0422 5.0kb upstream 5.0kb upstream 8509 true scaffold_2: 1784612-1793120 Capsella rubella
Carub.0002s0422 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1784612-1789611 Capsella rubella
Carub.0002s0422 5.0kb downstream 5.0kb downstream 8509 true scaffold_2: 1789612-1798120 Capsella rubella
Carub.0002s0422 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1793121-1798120 Capsella rubella
Carub.0002s0422 10.0kb upstream 10.0kb upstream 13509 true scaffold_2: 1779612-1793120 Capsella rubella
Carub.0002s0422 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1779612-1789611 Capsella rubella
Carub.0002s0422 10.0kb downstream 10.0kb downstream 13509 true scaffold_2: 1789612-1803120 Capsella rubella
Carub.0002s0422 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1793121-1803120 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367907 5261 Brassicaceae View MSA
123829010 5264 Brassicales-Malvales View MSA
124339794 5266 SBM View MSA
124244031 5268 Malvidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain