Gene : Carub.0002s0315 C. rubella v1.1
Defline:  (1 of 4) PTHR11206//PTHR11206:SF140 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  315
Name:  ? Carub.0002s0315 Secondary Identifier:  ? PAC:39245601
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0315 0.5kb upstream 0.5kb upstream 4722 true scaffold_2: 1320927-1325648 Capsella rubella
Carub.0002s0315 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1320927-1321426 Capsella rubella
Carub.0002s0315 0.5kb downstream 0.5kb downstream 4722 true scaffold_2: 1321427-1326148 Capsella rubella
Carub.0002s0315 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1325649-1326148 Capsella rubella
Carub.0002s0315 1.0kb upstream 1.0kb upstream 5222 true scaffold_2: 1320427-1325648 Capsella rubella
Carub.0002s0315 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1320427-1321426 Capsella rubella
Carub.0002s0315 1.0kb downstream 1.0kb downstream 5222 true scaffold_2: 1321427-1326648 Capsella rubella
Carub.0002s0315 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1325649-1326648 Capsella rubella
Carub.0002s0315 2.0kb upstream 2.0kb upstream 6222 true scaffold_2: 1319427-1325648 Capsella rubella
Carub.0002s0315 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1319427-1321426 Capsella rubella
Carub.0002s0315 2.0kb downstream 2.0kb downstream 6222 true scaffold_2: 1321427-1327648 Capsella rubella
Carub.0002s0315 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1325649-1327648 Capsella rubella
Carub.0002s0315 5.0kb upstream 5.0kb upstream 9222 true scaffold_2: 1316427-1325648 Capsella rubella
Carub.0002s0315 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1316427-1321426 Capsella rubella
Carub.0002s0315 5.0kb downstream 5.0kb downstream 9222 true scaffold_2: 1321427-1330648 Capsella rubella
Carub.0002s0315 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1325649-1330648 Capsella rubella
Carub.0002s0315 10.0kb upstream 10.0kb upstream 14222 true scaffold_2: 1311427-1325648 Capsella rubella
Carub.0002s0315 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1311427-1321426 Capsella rubella
Carub.0002s0315 10.0kb downstream 10.0kb downstream 14222 true scaffold_2: 1321427-1335648 Capsella rubella
Carub.0002s0315 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1325649-1335648 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374149 5261 Brassicaceae View MSA
123800689 5264 Brassicales-Malvales View MSA
124298069 5266 SBM View MSA
124149807 5268 Malvidae View MSA
124071772 5270 Rosid View MSA
123747983 5271 Pentapetalae View MSA
122786922 5272 Eudicot View MSA
122050249 5273 Angiosperm View MSA
121311823 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain