Gene : Carub.0006s1141 C. rubella v1.1
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  1141
Name:  ? Carub.0006s1141 Secondary Identifier:  ? PAC:39246706
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1141 0.5kb upstream 0.5kb upstream 3482 true scaffold_6: 4223164-4226645 Capsella rubella
Carub.0006s1141 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4226146-4226645 Capsella rubella
Carub.0006s1141 0.5kb downstream 0.5kb downstream 3482 true scaffold_6: 4222664-4226145 Capsella rubella
Carub.0006s1141 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4222664-4223163 Capsella rubella
Carub.0006s1141 1.0kb upstream 1.0kb upstream 3982 true scaffold_6: 4223164-4227145 Capsella rubella
Carub.0006s1141 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4226146-4227145 Capsella rubella
Carub.0006s1141 1.0kb downstream 1.0kb downstream 3982 true scaffold_6: 4222164-4226145 Capsella rubella
Carub.0006s1141 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4222164-4223163 Capsella rubella
Carub.0006s1141 2.0kb upstream 2.0kb upstream 4982 true scaffold_6: 4223164-4228145 Capsella rubella
Carub.0006s1141 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4226146-4228145 Capsella rubella
Carub.0006s1141 2.0kb downstream 2.0kb downstream 4982 true scaffold_6: 4221164-4226145 Capsella rubella
Carub.0006s1141 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4221164-4223163 Capsella rubella
Carub.0006s1141 5.0kb upstream 5.0kb upstream 7982 true scaffold_6: 4223164-4231145 Capsella rubella
Carub.0006s1141 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4226146-4231145 Capsella rubella
Carub.0006s1141 5.0kb downstream 5.0kb downstream 7982 true scaffold_6: 4218164-4226145 Capsella rubella
Carub.0006s1141 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4218164-4223163 Capsella rubella
Carub.0006s1141 10.0kb upstream 10.0kb upstream 12982 true scaffold_6: 4223164-4236145 Capsella rubella
Carub.0006s1141 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4226146-4236145 Capsella rubella
Carub.0006s1141 10.0kb downstream 10.0kb downstream 12982 true scaffold_6: 4213164-4226145 Capsella rubella
Carub.0006s1141 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4213164-4223163 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372796 5261 Brassicaceae View MSA
123833587 5264 Brassicales-Malvales View MSA
124342068 5266 SBM View MSA
124244624 5268 Malvidae View MSA
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain