Gene : Carub.0002s0348 C. rubella v1.1
Defline:  (1 of 2) PTHR21229:SF1 - PROTEIN C52B9.4 Genomic Order:  348
Name:  ? Carub.0002s0348 Secondary Identifier:  ? PAC:39243706
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0348 0.5kb upstream 0.5kb upstream 3903 true scaffold_2: 1456594-1460496 Capsella rubella
Carub.0002s0348 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1459997-1460496 Capsella rubella
Carub.0002s0348 0.5kb downstream 0.5kb downstream 3903 true scaffold_2: 1456094-1459996 Capsella rubella
Carub.0002s0348 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1456094-1456593 Capsella rubella
Carub.0002s0348 1.0kb upstream 1.0kb upstream 4403 true scaffold_2: 1456594-1460996 Capsella rubella
Carub.0002s0348 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1459997-1460996 Capsella rubella
Carub.0002s0348 1.0kb downstream 1.0kb downstream 4403 true scaffold_2: 1455594-1459996 Capsella rubella
Carub.0002s0348 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1455594-1456593 Capsella rubella
Carub.0002s0348 2.0kb upstream 2.0kb upstream 5403 true scaffold_2: 1456594-1461996 Capsella rubella
Carub.0002s0348 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1459997-1461996 Capsella rubella
Carub.0002s0348 2.0kb downstream 2.0kb downstream 5403 true scaffold_2: 1454594-1459996 Capsella rubella
Carub.0002s0348 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1454594-1456593 Capsella rubella
Carub.0002s0348 5.0kb upstream 5.0kb upstream 8403 true scaffold_2: 1456594-1464996 Capsella rubella
Carub.0002s0348 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1459997-1464996 Capsella rubella
Carub.0002s0348 5.0kb downstream 5.0kb downstream 8403 true scaffold_2: 1451594-1459996 Capsella rubella
Carub.0002s0348 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1451594-1456593 Capsella rubella
Carub.0002s0348 10.0kb upstream 10.0kb upstream 13403 true scaffold_2: 1456594-1469996 Capsella rubella
Carub.0002s0348 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1459997-1469996 Capsella rubella
Carub.0002s0348 10.0kb downstream 10.0kb downstream 13403 true scaffold_2: 1446594-1459996 Capsella rubella
Carub.0002s0348 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1446594-1456593 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026531 5273 Angiosperm View MSA
122373691 5261 Brassicaceae View MSA
123834203 5264 Brassicales-Malvales View MSA
124339939 5266 SBM View MSA
124246747 5268 Malvidae View MSA
124065573 5270 Rosid View MSA
123740547 5271 Pentapetalae View MSA
122786010 5272 Eudicot View MSA
121348761 5274 Embryophyte View MSA
123425075 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain