Gene : Carub.0002s0358 C. rubella v1.1
Defline:  (1 of 8) PF00954//PF01453//PF07714//PF08276 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) Genomic Order:  358
Name:  ? Carub.0002s0358 Secondary Identifier:  ? PAC:39243163
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0358 0.5kb upstream 0.5kb upstream 3759 true scaffold_2: 1506568-1510326 Capsella rubella
Carub.0002s0358 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1509827-1510326 Capsella rubella
Carub.0002s0358 0.5kb downstream 0.5kb downstream 3759 true scaffold_2: 1506068-1509826 Capsella rubella
Carub.0002s0358 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1506068-1506567 Capsella rubella
Carub.0002s0358 1.0kb upstream 1.0kb upstream 4259 true scaffold_2: 1506568-1510826 Capsella rubella
Carub.0002s0358 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1509827-1510826 Capsella rubella
Carub.0002s0358 1.0kb downstream 1.0kb downstream 4259 true scaffold_2: 1505568-1509826 Capsella rubella
Carub.0002s0358 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1505568-1506567 Capsella rubella
Carub.0002s0358 2.0kb upstream 2.0kb upstream 5259 true scaffold_2: 1506568-1511826 Capsella rubella
Carub.0002s0358 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1509827-1511826 Capsella rubella
Carub.0002s0358 2.0kb downstream 2.0kb downstream 5259 true scaffold_2: 1504568-1509826 Capsella rubella
Carub.0002s0358 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1504568-1506567 Capsella rubella
Carub.0002s0358 5.0kb upstream 5.0kb upstream 8259 true scaffold_2: 1506568-1514826 Capsella rubella
Carub.0002s0358 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1509827-1514826 Capsella rubella
Carub.0002s0358 5.0kb downstream 5.0kb downstream 8259 true scaffold_2: 1501568-1509826 Capsella rubella
Carub.0002s0358 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1501568-1506567 Capsella rubella
Carub.0002s0358 10.0kb upstream 10.0kb upstream 13259 true scaffold_2: 1506568-1519826 Capsella rubella
Carub.0002s0358 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1509827-1519826 Capsella rubella
Carub.0002s0358 10.0kb downstream 10.0kb downstream 13259 true scaffold_2: 1496568-1509826 Capsella rubella
Carub.0002s0358 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1496568-1506567 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378342 5261 Brassicaceae View MSA
123837958 5264 Brassicales-Malvales View MSA
124343429 5266 SBM View MSA
124242564 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain