Gene : Carub.0006s1140 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1140
Name:  ? Carub.0006s1140 Secondary Identifier:  ? PAC:39248682
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1140 0.5kb upstream 0.5kb upstream 2552 true scaffold_6: 4220607-4223158 Capsella rubella
Carub.0006s1140 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4220607-4221106 Capsella rubella
Carub.0006s1140 0.5kb downstream 0.5kb downstream 2552 true scaffold_6: 4221107-4223658 Capsella rubella
Carub.0006s1140 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4223159-4223658 Capsella rubella
Carub.0006s1140 1.0kb upstream 1.0kb upstream 3052 true scaffold_6: 4220107-4223158 Capsella rubella
Carub.0006s1140 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4220107-4221106 Capsella rubella
Carub.0006s1140 1.0kb downstream 1.0kb downstream 3052 true scaffold_6: 4221107-4224158 Capsella rubella
Carub.0006s1140 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4223159-4224158 Capsella rubella
Carub.0006s1140 2.0kb upstream 2.0kb upstream 4052 true scaffold_6: 4219107-4223158 Capsella rubella
Carub.0006s1140 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4219107-4221106 Capsella rubella
Carub.0006s1140 2.0kb downstream 2.0kb downstream 4052 true scaffold_6: 4221107-4225158 Capsella rubella
Carub.0006s1140 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4223159-4225158 Capsella rubella
Carub.0006s1140 5.0kb upstream 5.0kb upstream 7052 true scaffold_6: 4216107-4223158 Capsella rubella
Carub.0006s1140 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4216107-4221106 Capsella rubella
Carub.0006s1140 5.0kb downstream 5.0kb downstream 7052 true scaffold_6: 4221107-4228158 Capsella rubella
Carub.0006s1140 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4223159-4228158 Capsella rubella
Carub.0006s1140 10.0kb upstream 10.0kb upstream 12052 true scaffold_6: 4211107-4223158 Capsella rubella
Carub.0006s1140 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4211107-4221106 Capsella rubella
Carub.0006s1140 10.0kb downstream 10.0kb downstream 12052 true scaffold_6: 4221107-4233158 Capsella rubella
Carub.0006s1140 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4223159-4233158 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344317 5261 Brassicaceae View MSA
123784342 5264 Brassicales-Malvales View MSA
124352084 5266 SBM View MSA
124252264 5268 Malvidae View MSA
124068900 5270 Rosid View MSA
123746563 5271 Pentapetalae View MSA
122790377 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain