Gene : Carub.0002s0139 C. rubella v1.1
Defline:  (1 of 3) PTHR31500//PTHR31500:SF9 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  139
Name:  ? Carub.0002s0139 Secondary Identifier:  ? PAC:39244044
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0139 0.5kb upstream 0.5kb upstream 3514 true scaffold_2: 569395-572908 Capsella rubella
Carub.0002s0139 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 569395-569894 Capsella rubella
Carub.0002s0139 0.5kb downstream 0.5kb downstream 3514 true scaffold_2: 569895-573408 Capsella rubella
Carub.0002s0139 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 572909-573408 Capsella rubella
Carub.0002s0139 1.0kb upstream 1.0kb upstream 4014 true scaffold_2: 568895-572908 Capsella rubella
Carub.0002s0139 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 568895-569894 Capsella rubella
Carub.0002s0139 1.0kb downstream 1.0kb downstream 4014 true scaffold_2: 569895-573908 Capsella rubella
Carub.0002s0139 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 572909-573908 Capsella rubella
Carub.0002s0139 2.0kb upstream 2.0kb upstream 5014 true scaffold_2: 567895-572908 Capsella rubella
Carub.0002s0139 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 567895-569894 Capsella rubella
Carub.0002s0139 2.0kb downstream 2.0kb downstream 5014 true scaffold_2: 569895-574908 Capsella rubella
Carub.0002s0139 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 572909-574908 Capsella rubella
Carub.0002s0139 5.0kb upstream 5.0kb upstream 8014 true scaffold_2: 564895-572908 Capsella rubella
Carub.0002s0139 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 564895-569894 Capsella rubella
Carub.0002s0139 5.0kb downstream 5.0kb downstream 8014 true scaffold_2: 569895-577908 Capsella rubella
Carub.0002s0139 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 572909-577908 Capsella rubella
Carub.0002s0139 10.0kb upstream 10.0kb upstream 13014 true scaffold_2: 559895-572908 Capsella rubella
Carub.0002s0139 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 559895-569894 Capsella rubella
Carub.0002s0139 10.0kb downstream 10.0kb downstream 13014 true scaffold_2: 569895-582908 Capsella rubella
Carub.0002s0139 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 572909-582908 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
122378586 5261 Brassicaceae View MSA
123840437 5264 Brassicales-Malvales View MSA
124346874 5266 SBM View MSA
124247975 5268 Malvidae View MSA
124069510 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain