Protein : Carub.0002s0163.1.p C. rubella v1.1

Secondary Identifier:  PAC:39244543 Organism Name:  Capsella rubella
Length:  1357   Name:  Carub.0002s0163.1.p
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Proteins

14 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR028083 Domain Spt6 acidic, N-terminal domain
IPR023097 Domain Tex RuvX-like domain
IPR023323 Domain Tex-like domain
IPR023311 Domain Methuselah ectodomain, domain 2
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0002s0163.1_CDS 4074   scaffold_2: 671241-675483 Capsella rubella

40 Ontology Annotations

Ontology Term Db Gene/Protein Name
G3DSA:2.170.180.11 GENE3D Carub.0002s0163.1.p
G3DSA:1.10.3500.10 GENE3D Carub.0002s0163.1.p
G3DSA:3.30.505.10 GENE3D Carub.0002s0163.1.p
G3DSA:2.40.50.140 GENE3D Carub.0002s0163.1.p
G3DSA:1.10.150.310 GENE3D Carub.0002s0163.1.p
SSF55550 SSF Carub.0002s0163.1.p
SSF47781 SSF Carub.0002s0163.1.p
SSF158832 SSF Carub.0002s0163.1.p
SSF53098 SSF Carub.0002s0163.1.p
SSF50249 SSF Carub.0002s0163.1.p
IPR003029 InterPro Carub.0002s0163.1.p
IPR000980 InterPro Carub.0002s0163.1.p
IPR012337 InterPro Carub.0002s0163.1.p
IPR010994 InterPro Carub.0002s0163.1.p
GO:0003677 GO Carub.0002s0163.1.p
GO:0003676 GO Carub.0002s0163.1.p
GO:0032784 GO Carub.0002s0163.1.p
GO:0006357 GO Carub.0002s0163.1.p
IPR023311 InterPro Carub.0002s0163.1.p
IPR027999 InterPro Carub.0002s0163.1.p
IPR023323 InterPro Carub.0002s0163.1.p
IPR017072 InterPro Carub.0002s0163.1.p
IPR012340 InterPro Carub.0002s0163.1.p
IPR023097 InterPro Carub.0002s0163.1.p
IPR022967 InterPro Carub.0002s0163.1.p
PTHR10145 PANTHER Carub.0002s0163.1.p
K11292 KEGG Carub.0002s0163.1.p
PF14632 PFAM Carub.0002s0163.1.p
PTHR10145:SF6 PANTHER Carub.0002s0163.1.p
IPR028083 InterPro Carub.0002s0163.1.p

0 Pathway Components

0 Pathways