Gene : Carub.0016s0013 C. rubella v1.1
Defline:  (1 of 6) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins Genomic Order:  13
Name:  ? Carub.0016s0013 Secondary Identifier:  ? PAC:39253162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0016s0013 0.5kb upstream 0.5kb upstream 2722 true scaffold_16: 157378-160099 Capsella rubella
Carub.0016s0013 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 157378-157877 Capsella rubella
Carub.0016s0013 0.5kb downstream 0.5kb downstream 2722 true scaffold_16: 157878-160599 Capsella rubella
Carub.0016s0013 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 160100-160599 Capsella rubella
Carub.0016s0013 1.0kb upstream 1.0kb upstream 3222 true scaffold_16: 156878-160099 Capsella rubella
Carub.0016s0013 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 156878-157877 Capsella rubella
Carub.0016s0013 1.0kb downstream 1.0kb downstream 3222 true scaffold_16: 157878-161099 Capsella rubella
Carub.0016s0013 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 160100-161099 Capsella rubella
Carub.0016s0013 2.0kb upstream 2.0kb upstream 4222 true scaffold_16: 155878-160099 Capsella rubella
Carub.0016s0013 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 155878-157877 Capsella rubella
Carub.0016s0013 2.0kb downstream 2.0kb downstream 4222 true scaffold_16: 157878-162099 Capsella rubella
Carub.0016s0013 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 160100-162099 Capsella rubella
Carub.0016s0013 5.0kb upstream 5.0kb upstream 7222 true scaffold_16: 152878-160099 Capsella rubella
Carub.0016s0013 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 152878-157877 Capsella rubella
Carub.0016s0013 5.0kb downstream 5.0kb downstream 7222 true scaffold_16: 157878-165099 Capsella rubella
Carub.0016s0013 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 160100-165099 Capsella rubella
Carub.0016s0013 10.0kb upstream 10.0kb upstream 12222 true scaffold_16: 147878-160099 Capsella rubella
Carub.0016s0013 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 147878-157877 Capsella rubella
Carub.0016s0013 10.0kb downstream 10.0kb downstream 12222 true scaffold_16: 157878-170099 Capsella rubella
Carub.0016s0013 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 160100-170099 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122338917 5261 Brassicaceae View MSA
123779436 5264 Brassicales-Malvales View MSA
124277760 5266 SBM View MSA
124132928 5268 Malvidae View MSA
124073687 5270 Rosid View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain