Gene : Carub.0002s0018 C. rubella v1.1
Defline:  (1 of 15) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  18
Name:  ? Carub.0002s0018 Secondary Identifier:  ? PAC:39243260
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0018 0.5kb upstream 0.5kb upstream 2485 true scaffold_2: 74388-76872 Capsella rubella
Carub.0002s0018 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 74388-74887 Capsella rubella
Carub.0002s0018 0.5kb downstream 0.5kb downstream 2485 true scaffold_2: 74888-77372 Capsella rubella
Carub.0002s0018 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 76873-77372 Capsella rubella
Carub.0002s0018 1.0kb upstream 1.0kb upstream 2985 true scaffold_2: 73888-76872 Capsella rubella
Carub.0002s0018 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 73888-74887 Capsella rubella
Carub.0002s0018 1.0kb downstream 1.0kb downstream 2985 true scaffold_2: 74888-77872 Capsella rubella
Carub.0002s0018 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 76873-77872 Capsella rubella
Carub.0002s0018 2.0kb upstream 2.0kb upstream 3985 true scaffold_2: 72888-76872 Capsella rubella
Carub.0002s0018 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 72888-74887 Capsella rubella
Carub.0002s0018 2.0kb downstream 2.0kb downstream 3985 true scaffold_2: 74888-78872 Capsella rubella
Carub.0002s0018 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 76873-78872 Capsella rubella
Carub.0002s0018 5.0kb upstream 5.0kb upstream 6985 true scaffold_2: 69888-76872 Capsella rubella
Carub.0002s0018 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 69888-74887 Capsella rubella
Carub.0002s0018 5.0kb downstream 5.0kb downstream 6985 true scaffold_2: 74888-81872 Capsella rubella
Carub.0002s0018 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 76873-81872 Capsella rubella
Carub.0002s0018 10.0kb upstream 10.0kb upstream 11985 true scaffold_2: 64888-76872 Capsella rubella
Carub.0002s0018 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 64888-74887 Capsella rubella
Carub.0002s0018 10.0kb downstream 10.0kb downstream 11985 true scaffold_2: 74888-86872 Capsella rubella
Carub.0002s0018 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 76873-86872 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344339 5261 Brassicaceae View MSA
123784362 5264 Brassicales-Malvales View MSA
124282542 5266 SBM View MSA
124256463 5268 Malvidae View MSA
124042295 5270 Rosid View MSA
123612674 5271 Pentapetalae View MSA
122647166 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain