Gene : Carub.0002s0061 C. rubella v1.1
Defline:  (1 of 2) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) / Phosphogluconic acid dehydrogenase Genomic Order:  61
Name:  ? Carub.0002s0061 Secondary Identifier:  ? PAC:39243989
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella OXIDATIVEPENT-PWY Capsella rubella pathologic  
Crubella PENTOSE-P-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0061 0.5kb upstream 0.5kb upstream 1964 true scaffold_2: 244813-246776 Capsella rubella
Carub.0002s0061 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 244813-245312 Capsella rubella
Carub.0002s0061 0.5kb downstream 0.5kb downstream 1964 true scaffold_2: 245313-247276 Capsella rubella
Carub.0002s0061 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 246777-247276 Capsella rubella
Carub.0002s0061 1.0kb upstream 1.0kb upstream 2464 true scaffold_2: 244313-246776 Capsella rubella
Carub.0002s0061 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 244313-245312 Capsella rubella
Carub.0002s0061 1.0kb downstream 1.0kb downstream 2464 true scaffold_2: 245313-247776 Capsella rubella
Carub.0002s0061 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 246777-247776 Capsella rubella
Carub.0002s0061 2.0kb upstream 2.0kb upstream 3464 true scaffold_2: 243313-246776 Capsella rubella
Carub.0002s0061 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 243313-245312 Capsella rubella
Carub.0002s0061 2.0kb downstream 2.0kb downstream 3464 true scaffold_2: 245313-248776 Capsella rubella
Carub.0002s0061 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 246777-248776 Capsella rubella
Carub.0002s0061 5.0kb upstream 5.0kb upstream 6464 true scaffold_2: 240313-246776 Capsella rubella
Carub.0002s0061 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 240313-245312 Capsella rubella
Carub.0002s0061 5.0kb downstream 5.0kb downstream 6464 true scaffold_2: 245313-251776 Capsella rubella
Carub.0002s0061 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 246777-251776 Capsella rubella
Carub.0002s0061 10.0kb upstream 10.0kb upstream 11464 true scaffold_2: 235313-246776 Capsella rubella
Carub.0002s0061 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 235313-245312 Capsella rubella
Carub.0002s0061 10.0kb downstream 10.0kb downstream 11464 true scaffold_2: 245313-256776 Capsella rubella
Carub.0002s0061 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 246777-256776 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376033 5261 Brassicaceae View MSA
123827873 5264 Brassicales-Malvales View MSA
124345460 5266 SBM View MSA
124242189 5268 Malvidae View MSA
124062586 5270 Rosid View MSA
123741270 5271 Pentapetalae View MSA
122792444 5272 Eudicot View MSA
122047871 5273 Angiosperm View MSA
121351017 5274 Embryophyte View MSA
123424238 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain