Gene : Carub.0007s3525 C. rubella v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  3525
Name:  ? Carub.0007s3525 Secondary Identifier:  ? PAC:39232991
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3525 0.5kb upstream 0.5kb upstream 2187 true scaffold_7: 16103508-16105694 Capsella rubella
Carub.0007s3525 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16103508-16104007 Capsella rubella
Carub.0007s3525 0.5kb downstream 0.5kb downstream 2187 true scaffold_7: 16104008-16106194 Capsella rubella
Carub.0007s3525 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 16105695-16106194 Capsella rubella
Carub.0007s3525 1.0kb upstream 1.0kb upstream 2687 true scaffold_7: 16103008-16105694 Capsella rubella
Carub.0007s3525 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16103008-16104007 Capsella rubella
Carub.0007s3525 1.0kb downstream 1.0kb downstream 2687 true scaffold_7: 16104008-16106694 Capsella rubella
Carub.0007s3525 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 16105695-16106694 Capsella rubella
Carub.0007s3525 2.0kb upstream 2.0kb upstream 3687 true scaffold_7: 16102008-16105694 Capsella rubella
Carub.0007s3525 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 16102008-16104007 Capsella rubella
Carub.0007s3525 2.0kb downstream 2.0kb downstream 3687 true scaffold_7: 16104008-16107694 Capsella rubella
Carub.0007s3525 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 16105695-16107694 Capsella rubella
Carub.0007s3525 5.0kb upstream 5.0kb upstream 6687 true scaffold_7: 16099008-16105694 Capsella rubella
Carub.0007s3525 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 16099008-16104007 Capsella rubella
Carub.0007s3525 5.0kb downstream 5.0kb downstream 6687 true scaffold_7: 16104008-16110694 Capsella rubella
Carub.0007s3525 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 16105695-16110694 Capsella rubella
Carub.0007s3525 10.0kb upstream 10.0kb upstream 11687 true scaffold_7: 16094008-16105694 Capsella rubella
Carub.0007s3525 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 16094008-16104007 Capsella rubella
Carub.0007s3525 10.0kb downstream 10.0kb downstream 11687 true scaffold_7: 16104008-16115694 Capsella rubella
Carub.0007s3525 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 16105695-16115694 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361670 5261 Brassicaceae View MSA
123833232 5264 Brassicales-Malvales View MSA
124346532 5266 SBM View MSA
124248160 5268 Malvidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain