Gene : Carub.0007s3545 C. rubella v1.1
Defline:  (1 of 1) PTHR22939:SF67 - PROTEASE DO-LIKE 9 Genomic Order:  3545
Name:  ? Carub.0007s3545 Secondary Identifier:  ? PAC:39234726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3545 0.5kb upstream 0.5kb upstream 3473 true scaffold_7: 16198040-16201512 Capsella rubella
Carub.0007s3545 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16201013-16201512 Capsella rubella
Carub.0007s3545 0.5kb downstream 0.5kb downstream 3473 true scaffold_7: 16197540-16201012 Capsella rubella
Carub.0007s3545 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 16197540-16198039 Capsella rubella
Carub.0007s3545 1.0kb upstream 1.0kb upstream 3973 true scaffold_7: 16198040-16202012 Capsella rubella
Carub.0007s3545 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16201013-16202012 Capsella rubella
Carub.0007s3545 1.0kb downstream 1.0kb downstream 3973 true scaffold_7: 16197040-16201012 Capsella rubella
Carub.0007s3545 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 16197040-16198039 Capsella rubella
Carub.0007s3545 2.0kb upstream 2.0kb upstream 4973 true scaffold_7: 16198040-16203012 Capsella rubella
Carub.0007s3545 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 16201013-16203012 Capsella rubella
Carub.0007s3545 2.0kb downstream 2.0kb downstream 4973 true scaffold_7: 16196040-16201012 Capsella rubella
Carub.0007s3545 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 16196040-16198039 Capsella rubella
Carub.0007s3545 5.0kb upstream 5.0kb upstream 7973 true scaffold_7: 16198040-16206012 Capsella rubella
Carub.0007s3545 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 16201013-16206012 Capsella rubella
Carub.0007s3545 5.0kb downstream 5.0kb downstream 7973 true scaffold_7: 16193040-16201012 Capsella rubella
Carub.0007s3545 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 16193040-16198039 Capsella rubella
Carub.0007s3545 10.0kb upstream 10.0kb upstream 12973 true scaffold_7: 16198040-16211012 Capsella rubella
Carub.0007s3545 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 16201013-16211012 Capsella rubella
Carub.0007s3545 10.0kb downstream 10.0kb downstream 12973 true scaffold_7: 16188040-16201012 Capsella rubella
Carub.0007s3545 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 16188040-16198039 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363287 5261 Brassicaceae View MSA
123830875 5264 Brassicales-Malvales View MSA
124342689 5266 SBM View MSA
124251646 5268 Malvidae View MSA
124072965 5270 Rosid View MSA
123741119 5271 Pentapetalae View MSA
122794115 5272 Eudicot View MSA
122046723 5273 Angiosperm View MSA
121346662 5274 Embryophyte View MSA
123426440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain